Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10731
         (545 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   4.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.0  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   4.0  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   5.3  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   7.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.0  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.3  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 178 FLAEQKDRFLKFVLQQSVLNQVQWTPVY 95
           FL + K R LK  +   ++  V WTP Y
Sbjct: 265 FLGKAKVRTLKMTIIIVLVFFVCWTPYY 292


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +3

Query: 102 GVHWTWLSTDCC 137
           G+ W ++  DCC
Sbjct: 547 GIAWLYVDNDCC 558


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 178 FLAEQKDRFLKFVLQQSVLNQVQWTPVY 95
           FL + K R LK  +   ++  V WTP Y
Sbjct: 265 FLGKAKVRTLKMTIIIVLVFFVCWTPYY 292


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 417 TRNLTVKPSTKPS 455
           T   T KPSTKP+
Sbjct: 174 TTKFTTKPSTKPT 186


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 15  SRQSKYSDVRKPPPQLRI 68
           S  SK S    PPPQL +
Sbjct: 220 SPNSKKSATPSPPPQLEV 237


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 9   SPSRQSKYSDVRKPPPQLRIASV 77
           SP+R     + + P PQ R  SV
Sbjct: 684 SPTRDKSKQNEKSPSPQQRSPSV 706


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +3

Query: 63  RIASVVMECCV*TGVHWT 116
           R+  V M+C      HWT
Sbjct: 179 RLLGVAMDCLKGNAKHWT 196


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,965
Number of Sequences: 336
Number of extensions: 2601
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)