Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10731
(545 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 220 3e-57
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 220 3e-57
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 220 3e-57
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 220 3e-57
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 111 2e-24
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 80 6e-15
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 33 0.86
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 33 0.86
M62302-2|AAA58501.1| 372|Homo sapiens growth/differentiation fa... 30 4.6
AL365410-1|CAB96954.1| 198|Homo sapiens hypothetical protein pr... 30 4.6
AC003972-2|AAB94786.1| 372|Homo sapiens GDF-1 protein. 30 4.6
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 220 bits (537), Expect = 3e-57
Identities = 102/141 (72%), Positives = 123/141 (87%)
Frame = +2
Query: 11 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSM 190
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++E R LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 191 VDIRVTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPR 370
VDIRV +G + + +ISKAL+A+YQKYVDEASKKEI DIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 371 RCEPKKFGGPGARARYQKSYR 433
RCE KKFGGPGARARYQKSYR
Sbjct: 126 RCESKKFGGPGARARYQKSYR 146
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 220 bits (537), Expect = 3e-57
Identities = 102/141 (72%), Positives = 123/141 (87%)
Frame = +2
Query: 11 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSM 190
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++E R LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 191 VDIRVTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPR 370
VDIRV +G + + +ISKAL+A+YQKYVDEASKKEI DIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 371 RCEPKKFGGPGARARYQKSYR 433
RCE KKFGGPGARARYQKSYR
Sbjct: 126 RCESKKFGGPGARARYQKSYR 146
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 220 bits (537), Expect = 3e-57
Identities = 102/141 (72%), Positives = 123/141 (87%)
Frame = +2
Query: 11 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSM 190
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++E R LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 191 VDIRVTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPR 370
VDIRV +G + + +ISKAL+A+YQKYVDEASKKEI DIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 371 RCEPKKFGGPGARARYQKSYR 433
RCE KKFGGPGARARYQKSYR
Sbjct: 126 RCESKKFGGPGARARYQKSYR 146
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 220 bits (537), Expect = 3e-57
Identities = 102/141 (72%), Positives = 123/141 (87%)
Frame = +2
Query: 11 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSM 190
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++E R LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 191 VDIRVTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPR 370
VDIRV +G + + +ISKAL+A+YQKYVDEASKKEI DIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 371 RCEPKKFGGPGARARYQKSYR 433
RCE KKFGGPGARARYQKSYR
Sbjct: 126 RCESKKFGGPGARARYQKSYR 146
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 111 bits (266), Expect = 2e-24
Identities = 49/69 (71%), Positives = 63/69 (91%)
Frame = +2
Query: 11 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSM 190
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++E R LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 191 VDIRVTSQG 217
VDIRV +G
Sbjct: 66 VDIRVRVKG 74
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 79.8 bits (188), Expect = 6e-15
Identities = 47/108 (43%), Positives = 64/108 (59%)
Frame = +2
Query: 14 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSMV 193
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 194 DIRVTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQ 337
DI V +G ISKAL+ Y KYVDEAS +EI D L +
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 32.7 bits (71), Expect = 0.86
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Frame = +2
Query: 35 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSMVDIRVTS 211
G++KTA A A K G G ++VNG L + Q + Q ++ D+ T
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLY-FPITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 212 QGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRS--LLVADPRRCEPK 385
G + + + ++KAL +F +T+ V++ R LL DPR E K
Sbjct: 333 SGGGRSAQAGAIRLAMAKALCSF------------VTEDEVEWMRQAGLLTTDPRVRERK 380
Query: 386 KFGGPGARARY 418
K G GAR ++
Sbjct: 381 KPGQEGARRKF 391
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 32.7 bits (71), Expect = 0.86
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Frame = +2
Query: 35 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSMVDIRVTS 211
G++KTA A A K G G ++VNG L + Q + Q ++ D+ T
Sbjct: 180 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLY-FPITQDREQLMFPFHFVDRLGKHDVTCTV 238
Query: 212 QGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRS--LLVADPRRCEPK 385
G + + + ++KAL +F +T+ V++ R LL DPR E K
Sbjct: 239 SGGGRSAQAGAIRLAMAKALCSF------------VTEDEVEWMRQAGLLTTDPRVRERK 286
Query: 386 KFGGPGARARY 418
K G GAR ++
Sbjct: 287 KPGQEGARRKF 297
>M62302-2|AAA58501.1| 372|Homo sapiens growth/differentiation
factor 1 protein.
Length = 372
Score = 30.3 bits (65), Expect = 4.6
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +2
Query: 314 EITDILVQYDRSLL--VADPRR-CEPKKFGGPGARARYQKSYR*AFNETIGWYR 466
E + +LV D L +A PRR EP GGPG R ++ Y +F E +GW+R
Sbjct: 232 EASLLLVTLDPRLCHPLARPRRDAEPVLGGGPGGACRARRLYV-SFRE-VGWHR 283
>AL365410-1|CAB96954.1| 198|Homo sapiens hypothetical protein
protein.
Length = 198
Score = 30.3 bits (65), Expect = 4.6
Identities = 12/20 (60%), Positives = 17/20 (85%), Gaps = 1/20 (5%)
Frame = +3
Query: 138 STNF-RNLSFCSARKNSLWS 194
S+NF +N+SFC R++SLWS
Sbjct: 49 SSNFEKNMSFCQIRRDSLWS 68
>AC003972-2|AAB94786.1| 372|Homo sapiens GDF-1 protein.
Length = 372
Score = 30.3 bits (65), Expect = 4.6
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +2
Query: 314 EITDILVQYDRSLL--VADPRR-CEPKKFGGPGARARYQKSYR*AFNETIGWYR 466
E + +LV D L +A PRR EP GGPG R ++ Y +F E +GW+R
Sbjct: 232 EASLLLVTLDPRLCHPLARPRRDAEPVLGGGPGGACRARRLYV-SFRE-VGWHR 283
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,723,204
Number of Sequences: 237096
Number of extensions: 1718194
Number of successful extensions: 3836
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3830
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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