Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10731
         (545 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78413-6|CAB01658.1|  144|Caenorhabditis elegans Hypothetical pr...   187   5e-48
Z93372-4|CAB07546.1|  301|Caenorhabditis elegans Hypothetical pr...    31   0.54 
Z36282-1|CAD45602.1|  424|Caenorhabditis elegans Hypothetical pr...    29   1.7  
AF455271-1|AAL65193.1|  424|Caenorhabditis elegans C21ORF80 prot...    29   1.7  
Z68302-1|CAA92634.2|  382|Caenorhabditis elegans Hypothetical pr...    29   2.2  
L11247-4|AAK84520.1|  392|Caenorhabditis elegans Hypothetical pr...    28   5.0  

>Z78413-6|CAB01658.1|  144|Caenorhabditis elegans Hypothetical
           protein T01C3.6 protein.
          Length = 144

 Score =  187 bits (455), Expect = 5e-48
 Identities = 85/140 (60%), Positives = 111/140 (79%)
 Frame = +2

Query: 14  IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSMV 193
           +Q+VQ FGRKKTATAVA+CK+G G+++VNGRPL+ +E ++L+ KLQEP+LL+GKE+F  V
Sbjct: 5   VQSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDV 64

Query: 194 DIRVTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPRR 373
           DIR+   G    +     +  ++KAL+A+Y KYVDE SK+E+ +I   YD+SLLVADPRR
Sbjct: 65  DIRIRVSGGGHVAQIYAVRQALAKALVAYYHKYVDEQSKRELKNIFAAYDKSLLVADPRR 124

Query: 374 CEPKKFGGPGARARYQKSYR 433
            E KKFGGPGARARYQKSYR
Sbjct: 125 RESKKFGGPGARARYQKSYR 144


>Z93372-4|CAB07546.1|  301|Caenorhabditis elegans Hypothetical
           protein BE10.4 protein.
          Length = 301

 Score = 31.1 bits (67), Expect = 0.54
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 290 YVDEASKKEITDILVQYDRSLLVADPRRCE 379
           + DE  +KE+ D+  QYDRS+ + D  R E
Sbjct: 151 FCDEVQQKEVGDLFHQYDRSIEIIDKVRHE 180


>Z36282-1|CAD45602.1|  424|Caenorhabditis elegans Hypothetical
           protein K10G9.3 protein.
          Length = 424

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +2

Query: 218 WWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPRRCEPKKFGG 397
           +W    S+RY   +     AF +KY+D   K++ T ++  + +      PRR      GG
Sbjct: 230 YWKARRSMRYSNDLVDVADAFRKKYLDSDDKRDKTKLVDDWTKE----KPRR---TAIGG 282

Query: 398 P 400
           P
Sbjct: 283 P 283


>AF455271-1|AAL65193.1|  424|Caenorhabditis elegans C21ORF80
           protein.
          Length = 424

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +2

Query: 218 WWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPRRCEPKKFGG 397
           +W    S+RY   +     AF +KY+D   K++ T ++  + +      PRR      GG
Sbjct: 230 YWKARRSMRYSNDLVDVADAFRKKYLDSDDKRDKTKLVDDWTKE----KPRR---TAIGG 282

Query: 398 P 400
           P
Sbjct: 283 P 283


>Z68302-1|CAA92634.2|  382|Caenorhabditis elegans Hypothetical
           protein ZK792.3 protein.
          Length = 382

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = -2

Query: 178 FLAEQKDRFLKFVLQQSVLNQVQW--TPVYTQHSMTTLAIRNCGGGFLTSEYLDCLDGL 8
           FL ++KD F  + L  ++LN + W  T ++ + +     IR   G    +E ++CL G+
Sbjct: 206 FLDQEKDMFWGWTLFMNLLNGITWETTGLFPRVTFCDFEIRETAGN-NRAETVECLIGI 263


>L11247-4|AAK84520.1|  392|Caenorhabditis elegans Hypothetical
           protein F09G8.3 protein.
          Length = 392

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 350 LLVADPRRCEPKKFGGPGARARY 418
           LL  DPR+ E  K   PGARA++
Sbjct: 365 LLTLDPRKNERSKVNQPGARAKW 387


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,426,988
Number of Sequences: 27780
Number of extensions: 243675
Number of successful extensions: 576
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)