Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10723
(714 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 71 1e-12
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 63 2e-10
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 60 1e-09
11_02_0012 - 7346282-7347136,7347234-7347593 58 5e-09
11_01_0767 + 6438648-6438809,6439146-6440000 58 9e-09
11_02_0014 - 7352619-7352918,7353173-7353418 55 5e-08
11_02_0011 - 7337618-7338496,7338596-7338991 55 6e-08
11_01_0771 + 6453130-6454488 55 6e-08
01_01_1152 + 9170628-9171899 50 2e-06
04_04_0619 + 26652923-26653267,26653440-26654273 49 3e-06
11_01_0750 - 6315126-6315896,6316371-6316784 47 1e-05
05_06_0044 - 25150322-25151260 35 0.074
08_02_0662 + 19789406-19789546,19789646-19789779,19790272-197904... 30 2.1
08_01_0224 + 1789447-1789633,1789959-1790261,1793380-1793542,179... 30 2.1
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893... 29 2.8
09_04_0124 + 14862603-14863937 29 3.7
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43... 29 4.8
01_06_0552 + 30166699-30166797,30167094-30167562,30171536-301718... 29 4.8
09_04_0752 + 19933604-19934278,19934679-19935387,19936118-199361... 28 6.4
08_02_0802 + 21386248-21387468 28 6.4
12_01_0013 - 99290-99299,99593-99703,100085-100587,100925-100995... 28 8.5
11_01_0013 - 103484-103493,103787-103897,104279-104781,105119-10... 28 8.5
05_01_0510 - 4253902-4254032,4254121-4255225 28 8.5
03_06_0169 - 32125193-32125666,32125774-32126148 28 8.5
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 28 8.5
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 70.5 bits (165), Expect = 1e-12
Identities = 36/65 (55%), Positives = 42/65 (64%)
Frame = +2
Query: 488 LEEYSRSKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSD 667
LEE R IN+W E T RIKD + D++ AT AVL NA+YFKG W SKFD R TSD
Sbjct: 138 LEEARRE--INEWFESATAGRIKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSD 195
Query: 668 RDFYV 682
FY+
Sbjct: 196 DVFYL 200
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 63.3 bits (147), Expect = 2e-10
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +2
Query: 506 SKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYV 682
+ +N WVE+ T+ IK+++ P S+ T VL NA+YFKGAW+ KFD T D +F++
Sbjct: 214 ASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFHL 272
Score = 61.7 bits (143), Expect = 6e-10
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +2
Query: 515 INDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYV 682
+N WV+ T+ IK++ P S++ T VL NA+YFKGAW+ KFD T D +F++
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFHL 524
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = +2
Query: 506 SKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDF 676
+ +N WV+ T+ IK+++ P S+ T VL NA+YFKGAW+ KFD T D +F
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEF 62
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/60 (45%), Positives = 36/60 (60%)
Frame = +2
Query: 500 SRSKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFY 679
S K IN WV + TN I++++ S+ TA VLVNAIYFKG WS+ F T+ F+
Sbjct: 123 SSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKFH 182
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 57.6 bits (133), Expect = 9e-09
Identities = 26/56 (46%), Positives = 36/56 (64%)
Frame = +2
Query: 509 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDF 676
K IN WV T N I +++ P+S S T V+ NAIYFKG W + FD+ T++R+F
Sbjct: 60 KEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEWLAPFDKSDTAEREF 115
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/64 (40%), Positives = 35/64 (54%)
Frame = +2
Query: 488 LEEYSRSKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSD 667
+E K IN+WV + TN I +++ S+ T VLVNAIYFKG WS F T+
Sbjct: 81 VEPKKSRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTT 140
Query: 668 RDFY 679
F+
Sbjct: 141 GKFH 144
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 54.8 bits (126), Expect = 6e-08
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 485 FLEEYSRS-KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLT 661
F + RS K IN WV + TN I +++ S+ TA VLVNAIYFKG WS+ F T
Sbjct: 129 FQRQPKRSRKKINKWVSKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSST 188
Query: 662 SDRDFY 679
+ F+
Sbjct: 189 TTGKFH 194
>11_01_0771 + 6453130-6454488
Length = 452
Score = 54.8 bits (126), Expect = 6e-08
Identities = 26/57 (45%), Positives = 31/57 (54%)
Frame = +2
Query: 509 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFY 679
K IN W T I D++ P S+ TA VL NAIYFKG W F+E T + FY
Sbjct: 175 KQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERKPFY 231
>01_01_1152 + 9170628-9171899
Length = 423
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +2
Query: 494 EYSRSKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRD 673
E +R + +N +V + T I+D++ P+S+ S+T VL NA++FKG WS F T
Sbjct: 157 EQARER-VNAFVSDATEGLIRDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAP 215
Query: 674 FYV 682
F++
Sbjct: 216 FHL 218
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = +2
Query: 515 INDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFY 679
+N ++ + TN R+ + ++P + S+T VL NA++FK W KF+ T R F+
Sbjct: 123 VNRFISQATNGRLNNTISPGTFGSSTKCVLANAMHFKATWGRKFESYDTQRRRFH 177
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = +2
Query: 515 INDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFY 679
IN WV+++T + L+ ++ T VL +A+YF+G W + D R T+++ FY
Sbjct: 146 INSWVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFY 200
>05_06_0044 - 25150322-25151260
Length = 312
Score = 34.7 bits (76), Expect = 0.074
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
Frame = +2
Query: 515 INDWVEENTNNRIKDLVN------PDSLSSATAAV-----LVNAIYFKGAWSSKFDERLT 661
IN+W T +KD+++ D A+ L N++YF W F LT
Sbjct: 40 INEWFSSQTGGFVKDILSNSIDDDDDGSGGGGGAISASVFLANSLYFNAYWDHPFFPHLT 99
Query: 662 SDRDFYVS 685
+ DF+VS
Sbjct: 100 EEGDFHVS 107
>08_02_0662 +
19789406-19789546,19789646-19789779,19790272-19790476,
19791233-19791367,19792117-19792746,19793180-19793356,
19795175-19795198
Length = 481
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/45 (44%), Positives = 22/45 (48%)
Frame = +2
Query: 572 DSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKTKPSST 706
DSLSS AW SK DE TSD+ Y S+T P ST
Sbjct: 413 DSLSSRGKVSTCPLCKTSFAWISKIDEAGTSDQKIY-SQTIPCST 456
>08_01_0224 +
1789447-1789633,1789959-1790261,1793380-1793542,
1793561-1793597,1794305-1794925
Length = 436
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 395 IRHFKLNAFN*SKITAFTREFCSYSIVVREADSFQKLFMGFTIRS 261
+RH ++ +N + + FC+Y+I + D KL G I+S
Sbjct: 130 VRHREITEYNPKQFCSIPTRFCAYNIAFFDLDKESKLARGPPIKS 174
>08_01_0906 +
8933230-8933797,8933894-8934543,8937956-8938615,
8939751-8939817,8940421-8940724,8942993-8942996,
8944539-8946449
Length = 1387
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/42 (28%), Positives = 28/42 (66%)
Frame = +3
Query: 312 DDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENF 437
+++++ A+K+ ++ ++KG+E+ A K++ G LDE+F
Sbjct: 594 NEESVANYCATKNNNVWNVKGLEVTGAIKLFDQRWGNLDEDF 635
>09_04_0124 + 14862603-14863937
Length = 444
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = -3
Query: 364 DRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKATEREEAAPKMPRGQRFSL 200
+RR R + +SSS +A S+SW S S E A ++ RG FSL
Sbjct: 384 NRRKRGQARRLAKASSSSSASVASSSASWASGSTVMDWASPEEA-ELQRGHGFSL 437
>12_01_0053 -
438527-438670,439038-439247,439401-439530,439672-439842,
440233-440355,440439-440543,440656-441332,441498-441604,
441970-442177,442178-442245,444209-444411,444580-444663,
444780-445109,445238-445438,445667-445744,446236-446306
Length = 969
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 330 TEFASKSRDLRSIKGVELKMANKVYVHDG 416
T+ S S+D++ ++ VE + N VHDG
Sbjct: 520 TQIPSASKDIKEVRAVEEFLPNDFVVHDG 548
>01_06_0552 +
30166699-30166797,30167094-30167562,30171536-30171879,
30172006-30172302
Length = 402
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 328 RIASSSGKPIAFKSSSWVSPSEAKATEREEAAPKMP 221
R + S G+P+ SSW + A + EE A ++P
Sbjct: 169 RASPSGGQPLQIVDSSWTPEPGSTAVKNEEDADELP 204
>09_04_0752 +
19933604-19934278,19934679-19935387,19936118-19936161,
19936607-19936704,19937056-19937160,19937694-19937757,
19938316-19938885
Length = 754
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 370 LIDRRSRLLLANSVRIASSSGK 305
LIDRR RLL NS A++SGK
Sbjct: 643 LIDRRRRLLEVNSAVAAAASGK 664
>08_02_0802 + 21386248-21387468
Length = 406
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = -3
Query: 364 DRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKATEREEAAPKMPRGQRFSL 200
+RR R + +SSS +A ++SW S S E A +M RG FSL
Sbjct: 346 ERRKRGRGRRLAKASSSSSASVASSTASWASGSTVMDWASPEEA-EMQRGDGFSL 399
>12_01_0013 -
99290-99299,99593-99703,100085-100587,100925-100995,
101413-101491,102336-102956
Length = 464
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -1
Query: 177 KHSGCEVIVSIFEYIREICDGCHCRDG--DSKQTNDC 73
K GC+ + + + GCHC DG + + +DC
Sbjct: 386 KLEGCDQAIGSDAVVEALRGGCHCLDGFRNGNEISDC 422
>11_01_0013 -
103484-103493,103787-103897,104279-104781,105119-105189,
105607-105685,106530-107153
Length = 465
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -1
Query: 177 KHSGCEVIVSIFEYIREICDGCHCRDG--DSKQTNDC 73
K GC+ + + + GCHC DG + + +DC
Sbjct: 387 KLEGCDQAIGSDAVVEALRGGCHCLDGFRNGNEISDC 423
>05_01_0510 - 4253902-4254032,4254121-4255225
Length = 411
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 322 ASSSGKPIAFKSSSWVSPSEAKATEREEAAPKMPR 218
A+SS P +SS SP+ + A AAPK+ R
Sbjct: 50 AASSPTPTTARSSPKPSPASSTAARTNHAAPKLAR 84
>03_06_0169 - 32125193-32125666,32125774-32126148
Length = 282
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 180 RSSEK*SREKRCPLGIFGAASSRSVALASDGETHE-ELLKA 299
RS+++ EK C IF V+ DGET E EL++A
Sbjct: 229 RSADEYGLEKDCVYAIFARDKYYEVSKVEDGETEEHELIEA 269
>01_06_0823 +
32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 331 QNSRVKAVIFDQLKALSLKWRIKYTFMMVEN*TRILQSFPGTSSIRTSKTLISRRI 498
+N + K +FD+LKA LK +T + EN +L F + +K I R++
Sbjct: 679 KNKKDKDEVFDELKAAGLKRPCSFTDISSEN--ALLLEFETATDAAAAKAHIRRQL 732
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,730,385
Number of Sequences: 37544
Number of extensions: 328007
Number of successful extensions: 1069
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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