Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10723
(714 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 70 2e-12
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 70 2e-12
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 64 1e-10
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 64 1e-10
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 59 4e-09
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 59 4e-09
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 59 4e-09
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 59 4e-09
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 59 4e-09
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 59 4e-09
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 53 2e-07
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 53 2e-07
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 53 2e-07
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 53 2e-07
U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein ... 41 8e-04
AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or cys... 41 8e-04
U39851-2|AAF99874.1| 540|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical p... 28 7.6
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 28 7.6
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 28 7.6
AF101319-6|AAC69351.1| 314|Caenorhabditis elegans Hypothetical ... 28 7.6
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 28 7.6
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/74 (40%), Positives = 46/74 (62%)
Frame = +2
Query: 485 FLEEYSRSKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTS 664
F ++ + +++IN++V ENT IK ++NPDS+S AVL NA YFK W +KF + T
Sbjct: 128 FEDQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANWQTKFKKESTY 187
Query: 665 DRDFYVSKTKPSST 706
R+F+ S+ T
Sbjct: 188 KREFFSSENSKRET 201
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/74 (40%), Positives = 46/74 (62%)
Frame = +2
Query: 485 FLEEYSRSKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTS 664
F ++ + +++IN++V ENT IK ++NPDS+S AVL NA YFK W +KF + T
Sbjct: 128 FEDQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANWQTKFKKESTY 187
Query: 665 DRDFYVSKTKPSST 706
R+F+ S+ T
Sbjct: 188 KREFFSSENSKRET 201
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/70 (42%), Positives = 47/70 (67%)
Frame = +2
Query: 485 FLEEYSRSKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTS 664
F + +K++N +VE +TN +IKDL+ DS ++A A LVNA+YFK W SKF + T+
Sbjct: 115 FSQTEQAAKTMNTFVENHTNGKIKDLIPADSANNAFA-FLVNAMYFKADWQSKFAKESTT 173
Query: 665 DRDFYVSKTK 694
R+F+ S+ +
Sbjct: 174 GREFFTSEAE 183
Score = 31.9 bits (69), Expect = 0.47
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +3
Query: 270 GETHEELLKAIGFPDDDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVV 446
G T +EL +G I EF+ + GVE K+ N+V+V+ + +++
Sbjct: 45 GSTQKELEDVLG---GSRIFEEFSGLMEAVGDTDNGVETKIVNRVFVNQAYTIHQDYLET 101
Query: 447 SRDVFNSDVQNIDFSKNTVAASLL 518
++ + +++DFS+ AA +
Sbjct: 102 VEKLYKASGESLDFSQTEQAAKTM 125
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/70 (42%), Positives = 47/70 (67%)
Frame = +2
Query: 485 FLEEYSRSKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTS 664
F + +K++N +VE +TN +IKDL+ DS ++A A LVNA+YFK W SKF + T+
Sbjct: 115 FSQTEQAAKTMNTFVENHTNGKIKDLIPADSANNAFA-FLVNAMYFKADWQSKFAKESTT 173
Query: 665 DRDFYVSKTK 694
R+F+ S+ +
Sbjct: 174 GREFFTSEAE 183
Score = 31.9 bits (69), Expect = 0.47
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +3
Query: 270 GETHEELLKAIGFPDDDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVV 446
G T +EL +G I EF+ + GVE K+ N+V+V+ + +++
Sbjct: 45 GSTQKELEDVLG---GSRIFEEFSGLMEAVGDTDNGVETKIVNRVFVNQAYTIHQDYLET 101
Query: 447 SRDVFNSDVQNIDFSKNTVAASLL 518
++ + +++DFS+ AA +
Sbjct: 102 VEKLYKASGESLDFSQTEQAAKTM 125
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/67 (38%), Positives = 43/67 (64%)
Frame = +2
Query: 485 FLEEYSRSKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTS 664
F + + +++IN++V ENT + IK ++ DS++S AVL NA+YFK W +KF + T
Sbjct: 119 FDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTF 178
Query: 665 DRDFYVS 685
+F+ S
Sbjct: 179 KSEFFSS 185
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = +3
Query: 216 PLGIFGAASSRSVALASDGETHEELLKA-IGFPDDDAIRTEFASKSRDLRSI-KGVELKM 389
PL I A S V +A+ GET +++ +A + D+ + FA+ S L + +G E+K+
Sbjct: 29 PLSIALALSL--VHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKL 86
Query: 390 ANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAASLL 518
AN V+ G K+ +++ + ++N+ ++DF A +
Sbjct: 87 ANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAI 129
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/67 (38%), Positives = 43/67 (64%)
Frame = +2
Query: 485 FLEEYSRSKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTS 664
F + + +++IN++V ENT + IK ++ DS++S AVL NA+YFK W +KF + T
Sbjct: 119 FDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTF 178
Query: 665 DRDFYVS 685
+F+ S
Sbjct: 179 KSEFFSS 185
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = +3
Query: 216 PLGIFGAASSRSVALASDGETHEELLKA-IGFPDDDAIRTEFASKSRDLRSI-KGVELKM 389
PL I A S V +A+ GET +++ +A + D+ + FA+ S L + +G E+K+
Sbjct: 29 PLSIALALSL--VHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKL 86
Query: 390 ANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAASLL 518
AN V+ G K+ +++ + ++N+ ++DF A +
Sbjct: 87 ANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAI 129
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/67 (38%), Positives = 43/67 (64%)
Frame = +2
Query: 485 FLEEYSRSKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTS 664
F + + +++IN++V ENT + IK ++ DS++S AVL NA+YFK W +KF + T
Sbjct: 119 FDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTF 178
Query: 665 DRDFYVS 685
+F+ S
Sbjct: 179 KSEFFSS 185
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = +3
Query: 216 PLGIFGAASSRSVALASDGETHEELLKA-IGFPDDDAIRTEFASKSRDLRSI-KGVELKM 389
PL I A S V +A+ GET +++ +A + D+ + FA+ S L + +G E+K+
Sbjct: 29 PLSIALALSL--VHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKL 86
Query: 390 ANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAASLL 518
AN V+ G K+ +++ + ++N+ ++DF A +
Sbjct: 87 ANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAI 129
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/67 (38%), Positives = 43/67 (64%)
Frame = +2
Query: 485 FLEEYSRSKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTS 664
F + + +++IN++V ENT + IK ++ DS++S AVL NA+YFK W +KF + T
Sbjct: 119 FDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTF 178
Query: 665 DRDFYVS 685
+F+ S
Sbjct: 179 KSEFFSS 185
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = +3
Query: 216 PLGIFGAASSRSVALASDGETHEELLKA-IGFPDDDAIRTEFASKSRDLRSI-KGVELKM 389
PL I A S V +A+ GET +++ +A + D+ + FA+ S L + +G E+K+
Sbjct: 29 PLSIALALSL--VHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKL 86
Query: 390 ANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAASLL 518
AN V+ G K+ +++ + ++N+ ++DF A +
Sbjct: 87 ANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAI 129
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/67 (38%), Positives = 43/67 (64%)
Frame = +2
Query: 485 FLEEYSRSKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTS 664
F + + +++IN++V ENT + IK ++ DS++S AVL NA+YFK W +KF + T
Sbjct: 119 FDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTF 178
Query: 665 DRDFYVS 685
+F+ S
Sbjct: 179 KSEFFSS 185
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = +3
Query: 216 PLGIFGAASSRSVALASDGETHEELLKA-IGFPDDDAIRTEFASKSRDLRSI-KGVELKM 389
PL I A S V +A+ GET +++ +A + D+ + FA+ S L + +G E+K+
Sbjct: 29 PLSIALALSL--VHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKL 86
Query: 390 ANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAASLL 518
AN V+ G K+ +++ + ++N+ ++DF A +
Sbjct: 87 ANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAI 129
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/67 (38%), Positives = 43/67 (64%)
Frame = +2
Query: 485 FLEEYSRSKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTS 664
F + + +++IN++V ENT + IK ++ DS++S AVL NA+YFK W +KF + T
Sbjct: 119 FDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTF 178
Query: 665 DRDFYVS 685
+F+ S
Sbjct: 179 KSEFFSS 185
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = +3
Query: 216 PLGIFGAASSRSVALASDGETHEELLKA-IGFPDDDAIRTEFASKSRDLRSI-KGVELKM 389
PL I A S V +A+ GET +++ +A + D+ + FA+ S L + +G E+K+
Sbjct: 29 PLSIALALSL--VHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKL 86
Query: 390 ANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAASLL 518
AN V+ G K+ +++ + ++N+ ++DF A +
Sbjct: 87 ANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAI 129
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = +2
Query: 509 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDF 676
+ IN +V TN +IK++ DS+ A A +L+N+IYFK W KFD S++DF
Sbjct: 125 QEINSFVNTATNGKIKNIATQDSIKDAIA-LLINSIYFKADWDDKFDGMSVSEQDF 179
Score = 34.7 bits (76), Expect = 0.066
Identities = 16/60 (26%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +3
Query: 315 DDAIRTEFASKSRDLRS-IKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 491
D+ + F+ S+++++ KGVE+ +ANKVY+ G ++ F + + +D +++D +
Sbjct: 60 DEQLVEHFSFVSKEVKNGTKGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT 119
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/70 (34%), Positives = 43/70 (61%)
Frame = +2
Query: 485 FLEEYSRSKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTS 664
F + +K +N ++ E+T +I D++ PD+L A +L+NAI+F+G W KF E +
Sbjct: 125 FKKSQEAAKIMNQFISESTKGKIPDMIKPDNLKDVDA-ILINAIFFQGDWRRKFGE--PA 181
Query: 665 DRDFYVSKTK 694
+ +F +S T+
Sbjct: 182 ESNFSISATE 191
Score = 34.7 bits (76), Expect = 0.066
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = +3
Query: 252 VALASDGETHEELLKAI--GFPDDDAIRT-EFASKSRDLRSIKGVELKMANKVYVHDGGK 422
V L + G T ++ ++ G D+ I F +K + S+ VE +AN+++V
Sbjct: 45 VHLGAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLN-SSVNDVETLIANRLFVSPEQA 103
Query: 423 LDENFAVVSRDVFNSDVQNIDFSKNTVAASLL 518
+ + F R+ +N++ IDF K+ AA ++
Sbjct: 104 IRKAFTDELREHYNAETATIDFKKSQEAAKIM 135
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/70 (34%), Positives = 43/70 (61%)
Frame = +2
Query: 485 FLEEYSRSKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTS 664
F + +K +N ++ E+T +I D++ PD+L A +L+NAI+F+G W KF E +
Sbjct: 125 FKKSQEAAKIMNQFISESTKGKIPDMIKPDNLKDVDA-ILINAIFFQGDWRRKFGE--PA 181
Query: 665 DRDFYVSKTK 694
+ +F +S T+
Sbjct: 182 ESNFSISATE 191
Score = 34.7 bits (76), Expect = 0.066
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = +3
Query: 252 VALASDGETHEELLKAI--GFPDDDAIRT-EFASKSRDLRSIKGVELKMANKVYVHDGGK 422
V L + G T ++ ++ G D+ I F +K + S+ VE +AN+++V
Sbjct: 45 VHLGAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLN-SSVNDVETLIANRLFVSPEQA 103
Query: 423 LDENFAVVSRDVFNSDVQNIDFSKNTVAASLL 518
+ + F R+ +N++ IDF K+ AA ++
Sbjct: 104 IRKAFTDELREHYNAETATIDFKKSQEAAKIM 135
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = +2
Query: 509 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDF 676
+ IN +V TN +IK++ DS+ A A +L+N+IYFK W KFD S++DF
Sbjct: 125 QEINSFVNTATNGKIKNIATQDSIKDAIA-LLINSIYFKADWDDKFDGMSVSEQDF 179
Score = 34.7 bits (76), Expect = 0.066
Identities = 16/60 (26%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +3
Query: 315 DDAIRTEFASKSRDLRS-IKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 491
D+ + F+ S+++++ KGVE+ +ANKVY+ G ++ F + + +D +++D +
Sbjct: 60 DEQLVEHFSFVSKEVKNGTKGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT 119
>U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein 8
protein.
Length = 339
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +2
Query: 509 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFY 679
K+IN + ENT+ IK + S+ V ++A F+ W +KF + TS ++F+
Sbjct: 128 KTINKLIRENTDGHIKKINTKISIDKDQVVVFLSAACFEAQWQNKFHKLSTSKKEFF 184
>AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 199
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +2
Query: 509 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFY 679
K+IN + ENT+ IK + S+ V ++A F+ W +KF + TS ++F+
Sbjct: 127 KTINKLIRENTDGHIKKINTKISIDKDQVVVFLSAACFEAQWQNKFHKLSTSKKEFF 183
>U39851-2|AAF99874.1| 540|Caenorhabditis elegans Hypothetical
protein C23G10.6 protein.
Length = 540
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +3
Query: 213 CPLGIFGAASSRSVALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRS 365
C LG F LAS ++ +L IG P+D + +S+S D S
Sbjct: 189 CGLGFFKKLGIEKTILASSCSLYDFILPDIGEPEDHSYVPSLSSQSGDQMS 239
>Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical
protein F54B8.16 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2
Query: 185 TSVNILAVKLSFPFLSTLERFVTAAIAAMAIVNKQMIVFMFV 60
TSV + +K +F F+ TLERF++ N++ I F ++
Sbjct: 87 TSVTMGIIKGTFAFMITLERFISVFFPIHYRNNRRKIPFYWI 128
>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
protein R05D3.1 protein.
Length = 1053
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +3
Query: 222 GIFGAASSRSVALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANKV 401
G+ + S+ + SD + H K G DDDAIR F D R K + N++
Sbjct: 517 GLGTSTSNEAREYFSDLDHHTVNFKYTGTTDDDAIRMAFDRDKSDER--KEWIRRSENEI 574
Query: 402 YVHDGGKLDENF 437
D GK + ++
Sbjct: 575 TNEDDGKTEISY 586
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide
exchange factorfor RAS protein.
Length = 1413
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -3
Query: 406 TYTLFAILSSTPLIDRRSRLLLANSVRIASSSGKPI--AFKSSSWVSPSEAKATEREEAA 233
T+ +L PL+ R SR +NSV + ++ P+ A KSS +S + + T
Sbjct: 1262 THPKIPVLQPPPLLPRSSRANQSNSVSLPPTTQAPMPPAPKSSGMMSTATSPTTLTTTTT 1321
Query: 232 PKMPRG 215
P G
Sbjct: 1322 PSSAGG 1327
>AF101319-6|AAC69351.1| 314|Caenorhabditis elegans Hypothetical
protein K08D9.1 protein.
Length = 314
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -3
Query: 304 PIAFKSSSWVSPSEAKATEREEAAPKMPRGQRFSLDYFSLLR*TFW 167
P S W+ K +RE +A K G RFSL + + FW
Sbjct: 105 PFDALSFMWIVAEYRKVIKREASAGKFTSGWRFSLLFLFPMLYCFW 150
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -3
Query: 406 TYTLFAILSSTPLIDRRSRLLLANSVRIASSSGKPI--AFKSSSWVSPSEAKATEREEAA 233
T+ +L PL+ R SR +NSV + ++ P+ A KSS +S + + T
Sbjct: 1262 THPKIPVLQPPPLLPRSSRANQSNSVSLPPTTQAPMPPAPKSSGMMSTATSPTTLTTTTT 1321
Query: 232 PKMPRG 215
P G
Sbjct: 1322 PSSAGG 1327
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,378,755
Number of Sequences: 27780
Number of extensions: 285634
Number of successful extensions: 1005
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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