Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10722
(391 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26 pro... 157 1e-38
U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26 pro... 157 1e-38
BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26 p... 157 1e-38
BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26 p... 157 1e-38
BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26 p... 157 1e-38
BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26 p... 157 1e-38
BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26 p... 157 1e-38
X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26 pro... 155 4e-38
AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl... 155 5e-38
AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-l... 146 2e-35
AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein. 146 2e-35
AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26 p... 52 5e-07
AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26 p... 41 0.001
X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26 pro... 35 0.081
U78181-1|AAB48981.1| 528|Homo sapiens sodium channel 2 protein. 30 3.1
U78180-1|AAB48980.1| 574|Homo sapiens sodium channel 2 protein. 30 3.1
EU078959-1|ABU48925.1| 528|Homo sapiens acid-sensing ion channe... 30 3.1
BC133707-1|AAI33708.1| 528|Homo sapiens amiloride-sensitive cat... 30 3.1
BC126112-1|AAI26113.1| 1237|Homo sapiens Ras protein-specific gu... 30 3.1
AF181250-1|AAD55268.1| 1237|Homo sapiens Ras guanine nucleotide ... 30 3.1
AF023130-1|AAB80953.1| 1237|Homo sapiens Ras-GRF2 protein. 30 3.1
BC067905-1|AAH67905.1| 246|Homo sapiens monocyte to macrophage ... 29 7.1
BC037881-1|AAH37881.2| 270|Homo sapiens MMD2 protein protein. 29 7.1
AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isofo... 29 7.1
AY424288-1|AAR08376.1| 246|Homo sapiens progestin and adipoQ re... 29 7.1
AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 29 7.1
AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 29 7.1
AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (auto... 29 7.1
AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (auto... 29 7.1
AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (auto... 29 7.1
AY354497-1|AAR10443.1| 2916|Homo sapiens cadherin protein protein. 28 9.3
AK000054-1|BAA90911.1| 959|Homo sapiens protein ( Homo sapiens ... 28 9.3
AC079298-1|AAY41019.1| 959|Homo sapiens unknown protein. 28 9.3
>X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 157 bits (381), Expect = 1e-38
Identities = 71/92 (77%), Positives = 80/92 (86%)
Frame = +2
Query: 2 TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 181
T+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 2 TKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDA 61
Query: 182 FQLPKLYAKLHYCVSCAIHSKVVRTDRRKTEE 277
+ LPKLY KLHYCVSCAIHSKVVR R+ +
Sbjct: 62 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARK 93
>U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 157 bits (381), Expect = 1e-38
Identities = 71/92 (77%), Positives = 80/92 (86%)
Frame = +2
Query: 2 TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 181
T+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 2 TKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDA 61
Query: 182 FQLPKLYAKLHYCVSCAIHSKVVRTDRRKTEE 277
+ LPKLY KLHYCVSCAIHSKVVR R+ +
Sbjct: 62 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARK 93
>BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 157 bits (381), Expect = 1e-38
Identities = 71/92 (77%), Positives = 80/92 (86%)
Frame = +2
Query: 2 TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 181
T+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 2 TKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDA 61
Query: 182 FQLPKLYAKLHYCVSCAIHSKVVRTDRRKTEE 277
+ LPKLY KLHYCVSCAIHSKVVR R+ +
Sbjct: 62 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARK 93
>BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 157 bits (381), Expect = 1e-38
Identities = 71/92 (77%), Positives = 80/92 (86%)
Frame = +2
Query: 2 TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 181
T+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 2 TKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDA 61
Query: 182 FQLPKLYAKLHYCVSCAIHSKVVRTDRRKTEE 277
+ LPKLY KLHYCVSCAIHSKVVR R+ +
Sbjct: 62 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARK 93
>BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 157 bits (381), Expect = 1e-38
Identities = 71/92 (77%), Positives = 80/92 (86%)
Frame = +2
Query: 2 TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 181
T+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 2 TKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDA 61
Query: 182 FQLPKLYAKLHYCVSCAIHSKVVRTDRRKTEE 277
+ LPKLY KLHYCVSCAIHSKVVR R+ +
Sbjct: 62 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARK 93
>BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 157 bits (381), Expect = 1e-38
Identities = 71/92 (77%), Positives = 80/92 (86%)
Frame = +2
Query: 2 TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 181
T+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 2 TKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDA 61
Query: 182 FQLPKLYAKLHYCVSCAIHSKVVRTDRRKTEE 277
+ LPKLY KLHYCVSCAIHSKVVR R+ +
Sbjct: 62 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARK 93
>BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 157 bits (381), Expect = 1e-38
Identities = 71/92 (77%), Positives = 80/92 (86%)
Frame = +2
Query: 2 TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 181
T+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 2 TKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDA 61
Query: 182 FQLPKLYAKLHYCVSCAIHSKVVRTDRRKTEE 277
+ LPKLY KLHYCVSCAIHSKVVR R+ +
Sbjct: 62 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARK 93
>X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 155 bits (377), Expect = 4e-38
Identities = 70/92 (76%), Positives = 79/92 (85%)
Frame = +2
Query: 2 TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 181
T+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 2 TKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDA 61
Query: 182 FQLPKLYAKLHYCVSCAIHSKVVRTDRRKTEE 277
+ LPKLY KLHYCVSC IHSKVVR R+ +
Sbjct: 62 YVLPKLYVKLHYCVSCVIHSKVVRNRSREARK 93
>AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl
Coenzyme A ).).
Length = 115
Score = 155 bits (376), Expect = 5e-38
Identities = 70/92 (76%), Positives = 79/92 (85%)
Frame = +2
Query: 2 TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 181
T+KRRN GRAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 2 TKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFDA 61
Query: 182 FQLPKLYAKLHYCVSCAIHSKVVRTDRRKTEE 277
+ LPKLY KLHYCVSCAIHSKVVR R+ +
Sbjct: 62 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARK 93
>AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-like
1 protein.
Length = 115
Score = 146 bits (355), Expect = 2e-35
Identities = 66/89 (74%), Positives = 74/89 (83%)
Frame = +2
Query: 2 TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 181
T+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+
Sbjct: 2 TKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFDA 61
Query: 182 FQLPKLYAKLHYCVSCAIHSKVVRTDRRK 268
+ LPKLY KLHYCVSCAIHSKVVR R+
Sbjct: 62 YVLPKLYVKLHYCVSCAIHSKVVRNRSRE 90
>AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein.
Length = 115
Score = 146 bits (354), Expect = 2e-35
Identities = 67/92 (72%), Positives = 76/92 (82%)
Frame = +2
Query: 2 TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 181
T+KRRN RAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 2 TKKRRNNVRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFDA 61
Query: 182 FQLPKLYAKLHYCVSCAIHSKVVRTDRRKTEE 277
+ LPKL KLHYCVSC IHSKVVR R+ +
Sbjct: 62 YVLPKLCVKLHYCVSCVIHSKVVRNRSREARK 93
>AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26
protein.
Length = 45
Score = 52.4 bits (120), Expect = 5e-07
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +2
Query: 182 FQLPKLYAKLHYCVSCAIHSKVVRTDRRKTEE 277
+ LPKLY KLHYCVSCAIHSKVVR R+ +
Sbjct: 1 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARK 32
>AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26
protein.
Length = 23
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/22 (86%), Positives = 22/22 (100%)
Frame = +2
Query: 110 KFVIRNIVEAAAVRDINDASVY 175
KFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 KFVIRNIVEAAAVRDISEASVF 22
>X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26
protein.
Length = 20
Score = 35.1 bits (77), Expect = 0.081
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 2 TRKRRNGGRAKHGRGHVK 55
T+KRRN GRAK GRGHV+
Sbjct: 2 TKKRRNNGRAKKGRGHVQ 19
>U78181-1|AAB48981.1| 528|Homo sapiens sodium channel 2 protein.
Length = 528
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 142 RRFYDVPNHELFDSLVLWHAPRAVCASHSFNVTTSMLG 29
R FYD H++ D L+ H VC++ F V + G
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG 192
>U78180-1|AAB48980.1| 574|Homo sapiens sodium channel 2 protein.
Length = 574
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 142 RRFYDVPNHELFDSLVLWHAPRAVCASHSFNVTTSMLG 29
R FYD H++ D L+ H VC++ F V + G
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG 192
>EU078959-1|ABU48925.1| 528|Homo sapiens acid-sensing ion channel
1a protein protein.
Length = 528
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 142 RRFYDVPNHELFDSLVLWHAPRAVCASHSFNVTTSMLG 29
R FYD H++ D L+ H VC++ F V + G
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG 192
>BC133707-1|AAI33708.1| 528|Homo sapiens amiloride-sensitive cation
channel 2, neuronal protein.
Length = 528
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 142 RRFYDVPNHELFDSLVLWHAPRAVCASHSFNVTTSMLG 29
R FYD H++ D L+ H VC++ F V + G
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG 192
>BC126112-1|AAI26113.1| 1237|Homo sapiens Ras protein-specific
guanine nucleotide-releasing factor 2 protein.
Length = 1237
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +2
Query: 71 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVV 250
NC + DK +K++ E R + YPMFQ+P+ LH ++ H V
Sbjct: 352 NCKQNRDFDKLLKQYEANPACEG---RMLETFLTYPMFQIPRYIITLHELLAHTPHEHVE 408
Query: 251 R 253
R
Sbjct: 409 R 409
>AF181250-1|AAD55268.1| 1237|Homo sapiens Ras guanine nucleotide
exchange factor 2 protein.
Length = 1237
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +2
Query: 71 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVV 250
NC + DK +K++ E R + YPMFQ+P+ LH ++ H V
Sbjct: 352 NCKQNRDFDKLLKQYEANPACEG---RMLETFLTYPMFQIPRYIITLHELLAHTPHEHVE 408
Query: 251 R 253
R
Sbjct: 409 R 409
>AF023130-1|AAB80953.1| 1237|Homo sapiens Ras-GRF2 protein.
Length = 1237
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +2
Query: 71 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVV 250
NC + DK +K++ E R + YPMFQ+P+ LH ++ H V
Sbjct: 352 NCKQNRDFDKLLKQYEANPACEG---RMLETFLTYPMFQIPRYIITLHELLAHTPHEHVE 408
Query: 251 R 253
R
Sbjct: 409 R 409
>BC067905-1|AAH67905.1| 246|Homo sapiens monocyte to macrophage
differentiation-associated 2 protein.
Length = 246
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -1
Query: 127 VPNHELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITALT 5
VP H+ + HA A CA+H+F + S+LG+S++ L+
Sbjct: 22 VPAHKRYQPTEYEHA--ANCATHAFWIIPSILGSSNLYFLS 60
>BC037881-1|AAH37881.2| 270|Homo sapiens MMD2 protein protein.
Length = 270
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -1
Query: 127 VPNHELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITALT 5
VP H+ + HA A CA+H+F + S+LG+S++ L+
Sbjct: 22 VPAHKRYQPTEYEHA--ANCATHAFWIIPSILGSSNLYFLS 60
>AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isoform B
protein.
Length = 5202
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 227 CAIHSKVVRTDRRKTEESVLLPRVTSLGTCHVH 325
CA SKVV + ES+L P +T+L +H
Sbjct: 3575 CATSSKVVAATTQGVPESILPPSITALSAVALH 3607
>AY424288-1|AAR08376.1| 246|Homo sapiens progestin and adipoQ
receptor family member X protein.
Length = 246
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -1
Query: 127 VPNHELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITALT 5
VP H+ + HA A CA+H+F + S+LG+S++ L+
Sbjct: 22 VPAHKRYQPTEYEHA--ANCATHAFWIIPSILGSSNLYFLS 60
>AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 227 CAIHSKVVRTDRRKTEESVLLPRVTSLGTCHVH 325
CA SKVV + ES+L P +T+L +H
Sbjct: 3575 CATSSKVVAATTQGVPESILPPSITALSAVALH 3607
>AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 227 CAIHSKVVRTDRRKTEESVLLPRVTSLGTCHVH 325
CA SKVV + ES+L P +T+L +H
Sbjct: 3575 CATSSKVVAATTQGVPESILPPSITALSAVALH 3607
>AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 227 CAIHSKVVRTDRRKTEESVLLPRVTSLGTCHVH 325
CA SKVV + ES+L P +T+L +H
Sbjct: 3575 CATSSKVVAATTQGVPESILPPSITALSAVALH 3607
>AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 227 CAIHSKVVRTDRRKTEESVLLPRVTSLGTCHVH 325
CA SKVV + ES+L P +T+L +H
Sbjct: 3575 CATSSKVVAATTQGVPESILPPSITALSAVALH 3607
>AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 227 CAIHSKVVRTDRRKTEESVLLPRVTSLGTCHVH 325
CA SKVV + ES+L P +T+L +H
Sbjct: 3575 CATSSKVVAATTQGVPESILPPSITALSAVALH 3607
>AY354497-1|AAR10443.1| 2916|Homo sapiens cadherin protein protein.
Length = 2916
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 220 RVMRHPQQSCQDRSKKDRRIRTPPKSNFPRD 312
R+ HP + C D + D R P S PRD
Sbjct: 2654 RINEHPYRKCSDSALSDHESRV-PDSGIPRD 2683
>AK000054-1|BAA90911.1| 959|Homo sapiens protein ( Homo sapiens
cDNA FLJ20047 fis, clone COL00577. ).
Length = 959
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 220 RVMRHPQQSCQDRSKKDRRIRTPPKSNFPRD 312
R+ HP + C D + D R P S PRD
Sbjct: 697 RINEHPYRKCSDSALSDHESRV-PDSGIPRD 726
>AC079298-1|AAY41019.1| 959|Homo sapiens unknown protein.
Length = 959
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 220 RVMRHPQQSCQDRSKKDRRIRTPPKSNFPRD 312
R+ HP + C D + D R P S PRD
Sbjct: 697 RINEHPYRKCSDSALSDHESRV-PDSGIPRD 726
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,006,189
Number of Sequences: 237096
Number of extensions: 935082
Number of successful extensions: 2427
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2427
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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