Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10722
         (391 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X14247-1|CAA32463.1|  114|Drosophila melanogaster ribosomal prot...   160   5e-40
X13625-1|CAB38441.1|  114|Drosophila melanogaster protein ( Dros...   160   5e-40
AY069761-1|AAL39906.1|  114|Drosophila melanogaster RE01079p pro...   160   5e-40
AE014134-2931|AAN11005.1|  114|Drosophila melanogaster CG10305-P...   160   5e-40
AE014134-2930|AAF53666.1|  114|Drosophila melanogaster CG10305-P...   160   5e-40
AE014134-2929|AAN11004.1|  114|Drosophila melanogaster CG10305-P...   160   5e-40
AY061244-1|AAL28792.1|  664|Drosophila melanogaster LD18373p pro...    28   5.0  
AE014298-1641|AAF48061.1|  664|Drosophila melanogaster CG11696-P...    28   5.0  

>X14247-1|CAA32463.1|  114|Drosophila melanogaster ribosomal protein
           S31 protein.
          Length = 114

 Score =  160 bits (389), Expect = 5e-40
 Identities = 73/89 (82%), Positives = 79/89 (88%)
 Frame = +2

Query: 2   TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 181
           T+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++  
Sbjct: 2   TKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDS 61

Query: 182 FQLPKLYAKLHYCVSCAIHSKVVRTDRRK 268
           + LPKLYAKLHYCVSCAIHSKVVR   R+
Sbjct: 62  YVLPKLYAKLHYCVSCAIHSKVVRNRSRE 90



 Score = 36.3 bits (80), Expect = 0.014
 Identities = 14/24 (58%), Positives = 21/24 (87%)
 Frame = +1

Query: 250 QDRSKKDRRIRTPPKSNFPRDMSR 321
           ++RS++ RRIRTPP  +FP+DM+R
Sbjct: 85  RNRSREARRIRTPPLRSFPKDMAR 108


>X13625-1|CAB38441.1|  114|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for putative ribosomal
           protein S31. ).
          Length = 114

 Score =  160 bits (389), Expect = 5e-40
 Identities = 73/89 (82%), Positives = 79/89 (88%)
 Frame = +2

Query: 2   TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 181
           T+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++  
Sbjct: 2   TKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDS 61

Query: 182 FQLPKLYAKLHYCVSCAIHSKVVRTDRRK 268
           + LPKLYAKLHYCVSCAIHSKVVR   R+
Sbjct: 62  YVLPKLYAKLHYCVSCAIHSKVVRNRSRE 90



 Score = 36.3 bits (80), Expect = 0.014
 Identities = 14/24 (58%), Positives = 21/24 (87%)
 Frame = +1

Query: 250 QDRSKKDRRIRTPPKSNFPRDMSR 321
           ++RS++ RRIRTPP  +FP+DM+R
Sbjct: 85  RNRSREARRIRTPPLRSFPKDMAR 108


>AY069761-1|AAL39906.1|  114|Drosophila melanogaster RE01079p
           protein.
          Length = 114

 Score =  160 bits (389), Expect = 5e-40
 Identities = 73/89 (82%), Positives = 79/89 (88%)
 Frame = +2

Query: 2   TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 181
           T+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++  
Sbjct: 2   TKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDS 61

Query: 182 FQLPKLYAKLHYCVSCAIHSKVVRTDRRK 268
           + LPKLYAKLHYCVSCAIHSKVVR   R+
Sbjct: 62  YVLPKLYAKLHYCVSCAIHSKVVRNRSRE 90



 Score = 36.3 bits (80), Expect = 0.014
 Identities = 14/24 (58%), Positives = 21/24 (87%)
 Frame = +1

Query: 250 QDRSKKDRRIRTPPKSNFPRDMSR 321
           ++RS++ RRIRTPP  +FP+DM+R
Sbjct: 85  RNRSREARRIRTPPLRSFPKDMAR 108


>AE014134-2931|AAN11005.1|  114|Drosophila melanogaster CG10305-PC,
           isoform C protein.
          Length = 114

 Score =  160 bits (389), Expect = 5e-40
 Identities = 73/89 (82%), Positives = 79/89 (88%)
 Frame = +2

Query: 2   TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 181
           T+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++  
Sbjct: 2   TKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDS 61

Query: 182 FQLPKLYAKLHYCVSCAIHSKVVRTDRRK 268
           + LPKLYAKLHYCVSCAIHSKVVR   R+
Sbjct: 62  YVLPKLYAKLHYCVSCAIHSKVVRNRSRE 90



 Score = 36.3 bits (80), Expect = 0.014
 Identities = 14/24 (58%), Positives = 21/24 (87%)
 Frame = +1

Query: 250 QDRSKKDRRIRTPPKSNFPRDMSR 321
           ++RS++ RRIRTPP  +FP+DM+R
Sbjct: 85  RNRSREARRIRTPPLRSFPKDMAR 108


>AE014134-2930|AAF53666.1|  114|Drosophila melanogaster CG10305-PB,
           isoform B protein.
          Length = 114

 Score =  160 bits (389), Expect = 5e-40
 Identities = 73/89 (82%), Positives = 79/89 (88%)
 Frame = +2

Query: 2   TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 181
           T+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++  
Sbjct: 2   TKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDS 61

Query: 182 FQLPKLYAKLHYCVSCAIHSKVVRTDRRK 268
           + LPKLYAKLHYCVSCAIHSKVVR   R+
Sbjct: 62  YVLPKLYAKLHYCVSCAIHSKVVRNRSRE 90



 Score = 36.3 bits (80), Expect = 0.014
 Identities = 14/24 (58%), Positives = 21/24 (87%)
 Frame = +1

Query: 250 QDRSKKDRRIRTPPKSNFPRDMSR 321
           ++RS++ RRIRTPP  +FP+DM+R
Sbjct: 85  RNRSREARRIRTPPLRSFPKDMAR 108


>AE014134-2929|AAN11004.1|  114|Drosophila melanogaster CG10305-PA,
           isoform A protein.
          Length = 114

 Score =  160 bits (389), Expect = 5e-40
 Identities = 73/89 (82%), Positives = 79/89 (88%)
 Frame = +2

Query: 2   TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 181
           T+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++  
Sbjct: 2   TKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDS 61

Query: 182 FQLPKLYAKLHYCVSCAIHSKVVRTDRRK 268
           + LPKLYAKLHYCVSCAIHSKVVR   R+
Sbjct: 62  YVLPKLYAKLHYCVSCAIHSKVVRNRSRE 90



 Score = 36.3 bits (80), Expect = 0.014
 Identities = 14/24 (58%), Positives = 21/24 (87%)
 Frame = +1

Query: 250 QDRSKKDRRIRTPPKSNFPRDMSR 321
           ++RS++ RRIRTPP  +FP+DM+R
Sbjct: 85  RNRSREARRIRTPPLRSFPKDMAR 108


>AY061244-1|AAL28792.1|  664|Drosophila melanogaster LD18373p
           protein.
          Length = 664

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 26  RAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRN 127
           +A H  G V  V+CT C R +  +++++K + R+
Sbjct: 465 KALHPDGPVAEVQCTLCGRWLRDERSLRKHLARH 498


>AE014298-1641|AAF48061.1|  664|Drosophila melanogaster CG11696-PA
           protein.
          Length = 664

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 26  RAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRN 127
           +A H  G V  V+CT C R +  +++++K + R+
Sbjct: 465 KALHPDGPVAEVQCTLCGRWLRDERSLRKHLARH 498


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,686,446
Number of Sequences: 53049
Number of extensions: 298303
Number of successful extensions: 941
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1086986940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)