Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10711
         (493 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15643-1|AAC46585.1|  184|Drosophila melanogaster ribosomal prot...   173   8e-44
AY094790-1|AAM11143.1|  184|Drosophila melanogaster LD17235p pro...   173   8e-44
AE013599-2887|AAF57560.1|  184|Drosophila melanogaster CG7726-PA...   173   8e-44
BT022593-1|AAY55009.1|  163|Drosophila melanogaster IP06777p pro...   127   7e-30
BT010256-1|AAQ23574.1| 1233|Drosophila melanogaster RE33713p pro...    29   3.4  

>U15643-1|AAC46585.1|  184|Drosophila melanogaster ribosomal protein
           DL11 protein.
          Length = 184

 Score =  173 bits (422), Expect = 8e-44
 Identities = 83/91 (91%), Positives = 86/91 (94%)
 Frame = +2

Query: 2   LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREY 181
           LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREY
Sbjct: 38  LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREY 97

Query: 182 ELRRDNFSATGNFGFGIQEHIDLGTSTIPQL 274
           ELRR+NFS+TGNFGFGIQEHIDLG    P +
Sbjct: 98  ELRRENFSSTGNFGFGIQEHIDLGIKYDPSI 128



 Score =  118 bits (284), Expect = 4e-27
 Identities = 51/58 (87%), Positives = 54/58 (93%)
 Frame = +1

Query: 247 LGYKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 420
           LG KYDPSIGIYGLDFYVVLGRPG+NV HR+RK+G VGF HRLTKEDAMKWFQQKYDG
Sbjct: 120 LGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDG 177


>AY094790-1|AAM11143.1|  184|Drosophila melanogaster LD17235p
           protein.
          Length = 184

 Score =  173 bits (422), Expect = 8e-44
 Identities = 83/91 (91%), Positives = 86/91 (94%)
 Frame = +2

Query: 2   LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREY 181
           LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREY
Sbjct: 38  LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREY 97

Query: 182 ELRRDNFSATGNFGFGIQEHIDLGTSTIPQL 274
           ELRR+NFS+TGNFGFGIQEHIDLG    P +
Sbjct: 98  ELRRENFSSTGNFGFGIQEHIDLGIKYDPSI 128



 Score =  118 bits (284), Expect = 4e-27
 Identities = 51/58 (87%), Positives = 54/58 (93%)
 Frame = +1

Query: 247 LGYKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 420
           LG KYDPSIGIYGLDFYVVLGRPG+NV HR+RK+G VGF HRLTKEDAMKWFQQKYDG
Sbjct: 120 LGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDG 177


>AE013599-2887|AAF57560.1|  184|Drosophila melanogaster CG7726-PA
           protein.
          Length = 184

 Score =  173 bits (422), Expect = 8e-44
 Identities = 83/91 (91%), Positives = 86/91 (94%)
 Frame = +2

Query: 2   LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREY 181
           LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREY
Sbjct: 38  LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREY 97

Query: 182 ELRRDNFSATGNFGFGIQEHIDLGTSTIPQL 274
           ELRR+NFS+TGNFGFGIQEHIDLG    P +
Sbjct: 98  ELRRENFSSTGNFGFGIQEHIDLGIKYDPSI 128



 Score =  118 bits (284), Expect = 4e-27
 Identities = 51/58 (87%), Positives = 54/58 (93%)
 Frame = +1

Query: 247 LGYKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 420
           LG KYDPSIGIYGLDFYVVLGRPG+NV HR+RK+G VGF HRLTKEDAMKWFQQKYDG
Sbjct: 120 LGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDG 177


>BT022593-1|AAY55009.1|  163|Drosophila melanogaster IP06777p
           protein.
          Length = 163

 Score =  127 bits (307), Expect = 7e-30
 Identities = 60/70 (85%), Positives = 63/70 (90%)
 Frame = +2

Query: 65  RYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHI 244
           R  VRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHI
Sbjct: 38  RRCVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHI 97

Query: 245 DLGTSTIPQL 274
           DLG    P +
Sbjct: 98  DLGIKYDPSI 107



 Score =  118 bits (284), Expect = 4e-27
 Identities = 51/58 (87%), Positives = 54/58 (93%)
 Frame = +1

Query: 247 LGYKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 420
           LG KYDPSIGIYGLDFYVVLGRPG+NV HR+RK+G VGF HRLTKEDAMKWFQQKYDG
Sbjct: 99  LGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDG 156


>BT010256-1|AAQ23574.1| 1233|Drosophila melanogaster RE33713p
           protein.
          Length = 1233

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
 Frame = +2

Query: 11  AAKVLEQLTGQQPVFSKAR--YTVRSFGIRRNEKIAVHCTVRGA--KAEEILERGLKVRE 178
           AA V E+ + +    +KA   +T+  F +  N+  A     +    + +   +RG  + +
Sbjct: 179 AAAVEEENSSESNTTTKASLAFTIDHFDVSENDSAAQAARYKNMMERFQNRHKRGASMSK 238

Query: 179 YELRRDNFSATGNFGFGIQ-EHIDLGTS 259
            E  +DN +AT N G   Q   +D G+S
Sbjct: 239 LETEKDNTTATSNSGRQSQRSSLDAGSS 266


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,222,299
Number of Sequences: 53049
Number of extensions: 461577
Number of successful extensions: 1126
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)