Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10701
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.83 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.9  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   2.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.5  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.5  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   4.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.7  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = +3

Query: 216  VNPRDDFKTRARYLQKSTNTMLPKPVRFGALAPRVPAPT-SWSIAPKEFSTSMKLR 380
            V+P      +      +  T   + V    LA  +P P  +W I   +F+TS K+R
Sbjct: 1299 VSPSASVPAKIASFDDTFTTTYKEDVTLPCLAVGLPPPVITWKIKGVQFTTSDKIR 1354


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 328  GAGTLGAKAPNLTGFGNIVFVLFCKY 251
            G G+ G+K+P + GF       F KY
Sbjct: 1119 GPGSTGSKSPPVAGFEESPHSKFLKY 1144


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 347 SKGVQYLNEIKDSVVAGFQ 403
           SK ++Y+N + D  VAGF+
Sbjct: 183 SKIIEYMNHLVDLGVAGFR 201


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 347 SKGVQYLNEIKDSVVAGFQ 403
           SK ++Y+N + D  VAGF+
Sbjct: 184 SKIIEYMNHLVDLGVAGFR 202


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 347 SKGVQYLNEIKDSVVAGFQ 403
           SK ++Y+N + D  VAGF+
Sbjct: 184 SKIIEYMNHLVDLGVAGFR 202


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -1

Query: 376 NFIEVLNSFGAIDQDVGAGTLGAKAPNLTGFG 281
           N ++ +N+     Q  G   +G  AP+   FG
Sbjct: 325 NHMQAMNNMAGTYQMTGYSAMGMAAPHHQNFG 356


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 705 LHNEHRCTCHLGLF 664
           +H  H+CTC  G +
Sbjct: 356 IHAGHKCTCPEGFY 369


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,767
Number of Sequences: 336
Number of extensions: 4290
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)