Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10701
(730 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0) 153 2e-37
SB_40813| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 1e-21
SB_9825| Best HMM Match : EFG_C (HMM E-Value=1.3e-33) 65 6e-11
SB_12004| Best HMM Match : EFG_C (HMM E-Value=1.2e-15) 45 5e-05
SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_43292| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 31 0.96
SB_35214| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 31 0.96
SB_48580| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 31 0.96
SB_5164| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 31 0.96
SB_23706| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 2.9
SB_30916| Best HMM Match : C2 (HMM E-Value=1.2e-17) 29 3.9
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 29 5.1
SB_3585| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_26912| Best HMM Match : C2 (HMM E-Value=1.4e-17) 28 8.9
SB_12853| Best HMM Match : RhoGAP (HMM E-Value=9.5e-13) 28 8.9
SB_19996| Best HMM Match : PKD_channel (HMM E-Value=0) 28 8.9
SB_9978| Best HMM Match : Pkinase (HMM E-Value=3.4e-17) 28 8.9
>SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0)
Length = 833
Score = 153 bits (370), Expect = 2e-37
Identities = 67/84 (79%), Positives = 75/84 (89%)
Frame = +2
Query: 260 EKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEEN 439
+ Y +DV EARKIW FGPEGTGPN+LVD SKGVQYLNEIKDSVVAGFQWA KEG + +EN
Sbjct: 612 DTYGWDVNEARKIWSFGPEGTGPNLLVDVSKGVQYLNEIKDSVVAGFQWATKEGPLCDEN 671
Query: 440 LRGVRFNIYDVTLHTDAIHRGGGK 511
+RGVRFNI+DVTLH DAIHRGGG+
Sbjct: 672 VRGVRFNIHDVTLHADAIHRGGGQ 695
Score = 147 bits (357), Expect = 7e-36
Identities = 66/86 (76%), Positives = 77/86 (89%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 ELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMP 182
ELHLEICLKDLEEDHACIP+KKS+PVVSYRE V+++S+Q+CLSKSPNKHNRLFM A P+
Sbjct: 525 ELHLEICLKDLEEDHACIPLKKSEPVVSYRECVSDKSNQMCLSKSPNKHNRLFMTAGPLE 584
Query: 183 DGLPEDIDEG-RVNPRDDFKTRARYL 257
+ LPEDID+G +NPR DFK RARYL
Sbjct: 585 EKLPEDIDDGCEINPRQDFKIRARYL 610
Score = 124 bits (299), Expect = 7e-29
Identities = 58/70 (82%), Positives = 61/70 (87%)
Frame = +1
Query: 508 QIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGT 687
QIIPT RR LYAC+LTA+P L+EPVY EIQCPE AVGGIYGVLNRRRG V EES VAGT
Sbjct: 695 QIIPTARRVLYACMLTAKPCLLEPVYSVEIQCPESAVGGIYGVLNRRRGQVLEESNVAGT 754
Query: 688 PMFIVKAYLP 717
PMFIVKAYLP
Sbjct: 755 PMFIVKAYLP 764
>SB_40813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 100 bits (239), Expect = 1e-21
Identities = 48/118 (40%), Positives = 67/118 (56%), Gaps = 4/118 (3%)
Frame = +2
Query: 254 FTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKEG 421
F KY++D+ AR IW FGPE TGPNILVD + + LN +KDS++ GFQWA +EG
Sbjct: 586 FQTKYDWDLLAARSIWAFGPENTGPNILVDDTLPSEVDKSLLNTVKDSIIQGFQWATREG 645
Query: 422 VMAEENLRGVRFNIYDVTLHTDAIHRGGGKSFQQLEDACMHVC*LLSPVSWSLYIFVK 595
+ +E +R V+F I D + + IHRGGG+ + +P Y FV+
Sbjct: 646 PLCDEPIRNVKFKILDAVIAGEPIHRGGGQIIPTARRVAYSAFLMATPRLMEPYFFVE 703
Score = 82.6 bits (195), Expect = 3e-16
Identities = 35/70 (50%), Positives = 48/70 (68%)
Frame = +1
Query: 508 QIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGT 687
QIIPT RR Y+ L A PRLMEP + E+Q P V +Y VL RRRGHV +++ V G+
Sbjct: 675 QIIPTARRVAYSAFLMATPRLMEPYFFVEVQAPADCVSSVYTVLARRRGHVTQDAPVPGS 734
Query: 688 PMFIVKAYLP 717
P++ +KA++P
Sbjct: 735 PLYTIKAFIP 744
Score = 65.7 bits (153), Expect = 4e-11
Identities = 30/72 (41%), Positives = 48/72 (66%)
Frame = +3
Query: 3 ELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMP 182
EL+L+ + DL ++ I IK +DPV+++ ETV E S C +++PNK N++ M A+P+
Sbjct: 502 ELYLDCIMHDLRRMYSEIDIKVADPVIAFCETVVETSSLKCFAETPNKKNKVTMIAEPLE 561
Query: 183 DGLPEDIDEGRV 218
GL EDI+ +V
Sbjct: 562 KGLAEDIENEKV 573
>SB_9825| Best HMM Match : EFG_C (HMM E-Value=1.3e-33)
Length = 119
Score = 64.9 bits (151), Expect = 6e-11
Identities = 26/54 (48%), Positives = 38/54 (70%)
Frame = +1
Query: 556 AQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLP 717
A PRLMEP + E+Q P V +Y VL RRRGHV +++ V G+P++ +KA++P
Sbjct: 1 ATPRLMEPYFFVEVQAPADCVSSVYTVLARRRGHVTQDAPVPGSPLYTIKAFIP 54
>SB_12004| Best HMM Match : EFG_C (HMM E-Value=1.2e-15)
Length = 549
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 559 QP-RLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLP 717
QP RLM +Y C IQ +G +Y V+ RR G V E G+ +F V+A LP
Sbjct: 407 QPMRLMAAMYTCHIQATAEVLGRMYAVIARREGRVLSEEMKEGSDVFDVEAVLP 460
Score = 42.7 bits (96), Expect = 3e-04
Identities = 15/33 (45%), Positives = 25/33 (75%)
Frame = +3
Query: 3 ELHLEICLKDLEEDHACIPIKKSDPVVSYRETV 101
E+HL+ C+ DL+ +AC+ + SDP++ +RETV
Sbjct: 10 EVHLQRCVDDLKRRYACVELNVSDPIIPFRETV 42
Score = 41.5 bits (93), Expect = 7e-04
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 17/97 (17%)
Frame = +2
Query: 245 RSVFTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGV------QYLNE----------- 373
+ F E + A IW FGP GTGPNIL++ Q L+E
Sbjct: 165 QEAFREAGKQWANAADHIWAFGPRGTGPNILLNRDPDYPRPSIWQCLDENAGYKAGEYKP 224
Query: 374 IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHT 484
S+V+GFQ G + E L GV F+I + L+T
Sbjct: 225 YDSSIVSGFQMTTLSGPLCAEPLMGVCFSIEHLVLNT 261
>SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1176
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 60 IKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLP--EDIDEGRVNPRDD 233
I+K+ Y+E + +E++ L + N+H+ + AQ P GL I+E + N R
Sbjct: 216 IEKAQKAFEYKENIEKEAEALRKQQLENRHSLISSNAQYHPQGLETYPSINEYKKNSRMV 275
Query: 234 FK 239
FK
Sbjct: 276 FK 277
>SB_43292| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 645
Score = 31.1 bits (67), Expect = 0.96
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 502 WWQIIPTTRRCLYACLLTAQPR 567
+W ++ TRRC Y C +T +P+
Sbjct: 220 YWSVLEPTRRCRYYCTITEKPK 241
>SB_35214| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 762
Score = 31.1 bits (67), Expect = 0.96
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 502 WWQIIPTTRRCLYACLLTAQPR 567
+W ++ TRRC Y C +T +P+
Sbjct: 72 YWSVLEPTRRCRYYCTITEKPK 93
>SB_48580| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 847
Score = 31.1 bits (67), Expect = 0.96
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 502 WWQIIPTTRRCLYACLLTAQPR 567
+W ++ TRRC Y C +T +P+
Sbjct: 220 YWSVLEPTRRCRYYCTITEKPK 241
>SB_5164| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 435
Score = 31.1 bits (67), Expect = 0.96
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 502 WWQIIPTTRRCLYACLLTAQPR 567
+W ++ TRRC Y C +T +P+
Sbjct: 220 YWSVLEPTRRCRYYCTITEKPK 241
>SB_23706| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 1021
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/69 (27%), Positives = 28/69 (40%)
Frame = +3
Query: 39 EDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRV 218
+DH C + + + V E D+ CL + P + M P+ D GR
Sbjct: 33 KDHTCAAL-----LYTKMTAVNLEGDEPCLMEKPREPRNNDMNTTHYGGKTPDPRDGGRD 87
Query: 219 NPRDDFKTR 245
PRDD K +
Sbjct: 88 GPRDDEKQK 96
>SB_30916| Best HMM Match : C2 (HMM E-Value=1.2e-17)
Length = 809
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 87 YRETVAEESDQLCLSKSPNKHN--RLFMKAQPMPDGLPEDIDEGRVNPRD 230
Y+ + L K N H+ LF K + +P L ED++EG V D
Sbjct: 230 YKSISTRRELYMLLLKRLNLHHLMSLFCKTKKLPVALSEDLEEGEVTEED 279
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 138 PNKHNRLFMKAQPMPDGLPEDIDEGRVNPRD 230
PN N F+KA P+ DG D + G + RD
Sbjct: 413 PNTGNTEFVKAIPIEDGESHDSNYGTIESRD 443
>SB_3585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 508 QIIPTTRRCLYACLLTAQPRLMEPVYL 588
+I+PT RR + LLT+ +PVY+
Sbjct: 544 EIVPTQRRKAFVALLTSTVNAKQPVYI 570
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 27.9 bits (59), Expect = 8.9
Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 6/127 (4%)
Frame = -2
Query: 396 PATTESLISLRY*TPLEQSTRMLGPVPSG---PKHQILRASVTSYSYFSVN---TERES* 235
PA TES+++ T + + +L P PSG P H AS S S+ SV+ +
Sbjct: 367 PAPTESVVTTATPTEIAVTKPLLPPKPSGLVSPPH----ASTKSGSFCSVDGNESANAEQ 422
Query: 234 SHRGDLRDPHQCPLADHQAWAEPS*TDGCACWATLRDRAGPIPQLRSHGTTRQGQTS*LE 55
SH G +R + PL P +G + +RS + S +
Sbjct: 423 SHPGKVRGGSKPPLPPKPQDLHPGSKEGSPVKVRTSSFEDNVGNVRSDAKHKDSMNSKEQ 482
Query: 54 CKHGPPQ 34
+ PQ
Sbjct: 483 LRQNFPQ 489
>SB_26912| Best HMM Match : C2 (HMM E-Value=1.4e-17)
Length = 232
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 81 VSYRETVAEESDQLCLS-KSPNKHN--RLFMKAQPMPDGLPEDIDEGRVNPRD 230
V +R + +D L+ + N H+ LF K + +P L ED++EG V D
Sbjct: 29 VKFRYVILNINDFAFLNNRRLNLHHLMSLFCKTKKLPVALSEDLEEGEVTEED 81
>SB_12853| Best HMM Match : RhoGAP (HMM E-Value=9.5e-13)
Length = 687
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 509 CHHLYGWHQYGVLHH 465
CHHLY H+Y HH
Sbjct: 371 CHHLYSHHRYRHRHH 385
>SB_19996| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 746
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 4/22 (18%)
Frame = +3
Query: 174 PMPDGLPEDIDEGR----VNPR 227
P+PDG+ E+IDEG+ +NPR
Sbjct: 721 PVPDGIYEEIDEGQIYDIINPR 742
>SB_9978| Best HMM Match : Pkinase (HMM E-Value=3.4e-17)
Length = 348
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 60 IKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNP-RDDF 236
+KK S + + + L K K ++ K + +PDGLPE+ + + D F
Sbjct: 25 VKKRRKPASRNPSSQHKKTEKKLKKVKEKVDQKLTKGKDIPDGLPEETSKKLFSAFADKF 84
Query: 237 KTRARYLQK 263
TR R K
Sbjct: 85 CTRIRIENK 93
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,287,921
Number of Sequences: 59808
Number of extensions: 586126
Number of successful extensions: 1501
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1496
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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