Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10701
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 166 1e-41
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 162 3e-40
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 89 3e-18
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 85 5e-17
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 36 0.022
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 33 0.28
Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical pr... 28 7.9
AY954523-1|AAX34431.1| 729|Caenorhabditis elegans anion transpo... 28 7.9
AY887907-1|AAX34419.1| 729|Caenorhabditis elegans anion transpo... 28 7.9
AC006625-1|AAK68277.2| 729|Caenorhabditis elegans Sulfate perme... 28 7.9
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 166 bits (404), Expect = 1e-41
Identities = 69/87 (79%), Positives = 82/87 (94%)
Frame = +2
Query: 251 VFTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMA 430
+ EKYEYDVTEARKIWCFGP+GTGPN+L+D +KGVQYLNEIKDSVVAGFQWA +EGV++
Sbjct: 628 ILAEKYEYDVTEARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLS 687
Query: 431 EENLRGVRFNIYDVTLHTDAIHRGGGK 511
+EN+RGVRFN++DVTLH DAIHRGGG+
Sbjct: 688 DENMRGVRFNVHDVTLHADAIHRGGGQ 714
Score = 149 bits (360), Expect = 3e-36
Identities = 67/85 (78%), Positives = 74/85 (87%)
Frame = +3
Query: 3 ELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMP 182
ELHLEICLKDLEEDHACIP+KKSDPVVSYRETV ES+Q+CLSKSPNKHNRL AQPMP
Sbjct: 545 ELHLEICLKDLEEDHACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHNRLHCTAQPMP 604
Query: 183 DGLPEDIDEGRVNPRDDFKTRARYL 257
DGL +DI+ G VN RD+FK RA+ L
Sbjct: 605 DGLADDIEGGTVNARDEFKARAKIL 629
Score = 130 bits (315), Expect = 8e-31
Identities = 59/70 (84%), Positives = 63/70 (90%)
Frame = +1
Query: 508 QIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGT 687
QIIPT RR YA +LTA+PRL+EPVYL EIQCPE AVGGIYGVLNRRRGHVFEESQV GT
Sbjct: 714 QIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGT 773
Query: 688 PMFIVKAYLP 717
PMF+VKAYLP
Sbjct: 774 PMFVVKAYLP 783
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 162 bits (393), Expect = 3e-40
Identities = 68/84 (80%), Positives = 80/84 (95%)
Frame = +2
Query: 260 EKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEEN 439
EKYEY VTEARKIWCFGP+GTGPN+L+D +KGVQYLNEIKDSVVAGFQWA +EGV+++EN
Sbjct: 631 EKYEYAVTEARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDEN 690
Query: 440 LRGVRFNIYDVTLHTDAIHRGGGK 511
+RGVRFN++DVTLH DAIHRGGG+
Sbjct: 691 MRGVRFNVHDVTLHADAIHRGGGQ 714
Score = 148 bits (359), Expect = 4e-36
Identities = 66/84 (78%), Positives = 74/84 (88%)
Frame = +3
Query: 3 ELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMP 182
ELHLEICLKDLEEDHACIP+KKSDPVVSYRETV ES+Q+CLSKSPNKHNRL AQPMP
Sbjct: 545 ELHLEICLKDLEEDHACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHNRLHCTAQPMP 604
Query: 183 DGLPEDIDEGRVNPRDDFKTRARY 254
DGL +DI+ G V+ RD+FK RA+Y
Sbjct: 605 DGLADDIEGGTVSARDEFKARAKY 628
Score = 130 bits (315), Expect = 8e-31
Identities = 59/70 (84%), Positives = 63/70 (90%)
Frame = +1
Query: 508 QIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGT 687
QIIPT RR YA +LTA+PRL+EPVYL EIQCPE AVGGIYGVLNRRRGHVFEESQV GT
Sbjct: 714 QIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGT 773
Query: 688 PMFIVKAYLP 717
PMF+VKAYLP
Sbjct: 774 PMFVVKAYLP 783
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
Frame = +2
Query: 254 FTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKEG 421
F KY +D+ AR IW FGP+ TGPNIL+D + + L+ +++S+V GFQWA +EG
Sbjct: 722 FQTKYNWDLLAARSIWAFGPDTTGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATREG 781
Query: 422 VMAEENLRGVRFNIYDVTLHTDAIHRGGGK 511
+ EE +R V+F + D + T+ ++RGGG+
Sbjct: 782 PLCEEPIRQVKFKLLDAAIATEPLYRGGGQ 811
Score = 81.0 bits (191), Expect = 8e-16
Identities = 34/70 (48%), Positives = 46/70 (65%)
Frame = +1
Query: 508 QIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGT 687
Q+IPT RRC Y+ L A PRLMEP Y E+ P V +Y VL +RRGHV ++ + G+
Sbjct: 811 QMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGS 870
Query: 688 PMFIVKAYLP 717
PM+ + AY+P
Sbjct: 871 PMYTISAYIP 880
Score = 59.3 bits (137), Expect = 3e-09
Identities = 33/109 (30%), Positives = 54/109 (49%)
Frame = +3
Query: 3 ELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMP 182
E +++ + D+ + + I IK +DPVV++ ETV E S C +++PNK N++ M A+P+
Sbjct: 638 EFYMDCVMHDMRKVFSEIDIKVADPVVTFNETVIETSTLKCFAETPNKKNKITMMAEPLE 697
Query: 183 DGLPEDIDEGRVNPRDDFKTRARYLQKSTNTMLPKPVRFGALAPRVPAP 329
L EDI+ V + + + Q N L A P P
Sbjct: 698 KQLDEDIENEVVQIGWNRRRLGEFFQTKYNWDLLAARSIWAFGPDTTGP 746
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/90 (42%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Frame = +2
Query: 254 FTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKEG 421
F KY +D+ AR IW FG + TGPNIL+D + + L+ +++S+V GFQWA +EG
Sbjct: 597 FQTKYNWDLLAARSIWAFGLDTTGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATREG 656
Query: 422 VMAEENLRGVRFNIYDVTLHTDAIHRGGGK 511
+ EE +R V+F + D + T+ ++RGGG+
Sbjct: 657 PLCEEPIRQVKFKLLDAAIATEPLYRGGGQ 686
Score = 81.0 bits (191), Expect = 8e-16
Identities = 34/70 (48%), Positives = 46/70 (65%)
Frame = +1
Query: 508 QIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGT 687
Q+IPT RRC Y+ L A PRLMEP Y E+ P V +Y VL +RRGHV ++ + G+
Sbjct: 686 QMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGS 745
Query: 688 PMFIVKAYLP 717
PM+ + AY+P
Sbjct: 746 PMYTISAYIP 755
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/68 (38%), Positives = 44/68 (64%)
Frame = +3
Query: 3 ELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMP 182
E +++ + D+ + + I IK +DPVV++ ETV E S C +++PNK N++ M A+P+
Sbjct: 513 EFYMDCVMHDMRKVFSEIDIKVADPVVTFNETVIETSTLKCFAETPNKKNKITMMAEPLE 572
Query: 183 DGLPEDID 206
L EDI+
Sbjct: 573 KQLDEDIE 580
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +3
Query: 3 ELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEES 113
E+HL+ C+KDL D + + S+P+V + ETV E+S
Sbjct: 524 EVHLQKCIKDLN-DLGLVDLDVSEPIVPFMETVIEDS 559
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +3
Query: 3 ELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEES 113
E+HL+ C+KDL D + + S+P+V + ETV E+S
Sbjct: 524 EVHLQKCIKDLN-DLGLVDLDVSEPIVPFMETVIEDS 559
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 32.7 bits (71), Expect = 0.28
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +3
Query: 48 ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPR 227
AC+PI VS E ++ES+ K +K + +KA + DG+P D D+G +
Sbjct: 228 ACLPISVKCDGVSDCENESDESNCNKCQKGAHKCGKNCIKASKVCDGIP-DCDDGSDEHQ 286
Query: 228 DDFKT 242
D KT
Sbjct: 287 CDCKT 291
>Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical
protein D2030.2b protein.
Length = 470
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +3
Query: 204 DEGRVNPRDDFKTRARYLQKSTNTMLPKPVRFGALAPRVPAPTSWSIAPKEFSTSMKLRT 383
DE R+ + R +Q+ +N P P A +PR APT ++ KE S ++
Sbjct: 88 DELRLGQMASSELRNSIMQQQSNNQPPSP----AQSPRNAAPTFRALPEKEQSVRLEKSN 143
Query: 384 LLWLDSSG 407
+L + SG
Sbjct: 144 VLLVGPSG 151
>Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical
protein D2030.2a protein.
Length = 586
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +3
Query: 204 DEGRVNPRDDFKTRARYLQKSTNTMLPKPVRFGALAPRVPAPTSWSIAPKEFSTSMKLRT 383
DE R+ + R +Q+ +N P P A +PR APT ++ KE S ++
Sbjct: 204 DELRLGQMASSELRNSIMQQQSNNQPPSP----AQSPRNAAPTFRALPEKEQSVRLEKSN 259
Query: 384 LLWLDSSG 407
+L + SG
Sbjct: 260 VLLVGPSG 267
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 372 KLRTLLWLDSSGPLRKELWLKRICVVFDST 461
K++TL+W PL KEL L+R+ V D +
Sbjct: 256 KVQTLIWAIGRDPLTKELNLERVGVKTDKS 285
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 372 KLRTLLWLDSSGPLRKELWLKRICVVFDST 461
K++TL+W PL KEL L+R+ V D +
Sbjct: 270 KVQTLIWAIGRDPLTKELNLERVGVKTDKS 299
>Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical
protein F22E10.1 protein.
Length = 1318
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Frame = +2
Query: 317 GTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVR----FNIYDVTLHT 484
G GP V S + ++ +AG K G +AEE+L GVR FN + +
Sbjct: 244 GIGPLCCVCMSLMSRSMSSFTSKELAG---VGKAGSIAEESLMGVRTVQAFNGQEEMVEK 300
Query: 485 DAIHRGGGKSF 517
+ G GKSF
Sbjct: 301 YTVELGKGKSF 311
>AY954523-1|AAX34431.1| 729|Caenorhabditis elegans anion
transporter SULP-1b protein.
Length = 729
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +3
Query: 225 RDDFKTR---ARYLQKSTNTMLPKPVRFGALAPRVPAPTSWS 341
+DDF TR A+Y +K TNT L K G +P W+
Sbjct: 20 QDDFDTRYNFAKYRKKKTNTELAKQFAIGDNWILYQSPNPWT 61
>AY887907-1|AAX34419.1| 729|Caenorhabditis elegans anion
transporter SULP-1a protein.
Length = 729
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +3
Query: 225 RDDFKTR---ARYLQKSTNTMLPKPVRFGALAPRVPAPTSWS 341
+DDF TR A+Y +K TNT L K G +P W+
Sbjct: 20 QDDFDTRYNFAKYRKKKTNTELAKQFAIGDNWILYQSPNPWT 61
>AC006625-1|AAK68277.2| 729|Caenorhabditis elegans Sulfate permease
family protein 1 protein.
Length = 729
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +3
Query: 225 RDDFKTR---ARYLQKSTNTMLPKPVRFGALAPRVPAPTSWS 341
+DDF TR A+Y +K TNT L K G +P W+
Sbjct: 20 QDDFDTRYNFAKYRKKKTNTELAKQFAIGDNWILYQSPNPWT 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,290,726
Number of Sequences: 27780
Number of extensions: 422111
Number of successful extensions: 1159
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -