Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10700
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.67 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.7  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   3.6  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   4.7  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   8.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.3  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 0.67
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = -3

Query: 402 CELNAQQTLLATHALWIVGQ---IVFLVSFLIITTVTFLL 292
           C L+   + L T    I G    ++F VSFLIIT V F++
Sbjct: 223 CTLHHHLSKLVTRFNEIFGLGLLLMFAVSFLIITQVIFVI 262


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 183 NTRLYATRNAPLRSTI 230
           N  LY TR  PLRS +
Sbjct: 52  NRELYGTRALPLRSAV 67


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 328 QFPHHHHGHLPSCVPT 281
           + PH  HG+L SC PT
Sbjct: 344 RMPHRCHGNLQSC-PT 358


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 333 LVSFLIITTVTFLLAFQQNQVFPLAQASPS 244
           L   L+ T VT+L+   Q Q+    +ASP+
Sbjct: 396 LFKSLLATMVTYLVVLLQFQISIPEEASPT 425


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +2

Query: 509 PGTASPRDPPKSTTARISPLSARLAVSLD 595
           P  +SPR  P  +   +SP+   L ++ +
Sbjct: 224 PTKSSPRSSPVQSDVSLSPVHEPLLITTE 252


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 559 NPCCRRLRRVTW 524
           +PCC  +RR  W
Sbjct: 584 SPCCITMRRYGW 595


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 257 KLHPHLPSSNCTAERCVARCVKPCIHRVS 171
           K HP   +  C  +RC  R +K  I  VS
Sbjct: 50  KSHPPQWTWQCINQRCERRHIKGAIPVVS 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,966
Number of Sequences: 336
Number of extensions: 1815
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)