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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10699X
         (332 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_13063| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.18 
SB_20037| Best HMM Match : 7tm_1 (HMM E-Value=3.09687e-43)             27   5.0  
SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   6.6  
SB_10833| Best HMM Match : RNase_PH_C (HMM E-Value=0.26)               26   8.8  

>SB_13063| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 238

 Score = 31.5 bits (68), Expect = 0.18
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +3

Query: 276 RYVGEIGDVVVGRVLEVQ 329
           RY GEIGDVVVGR+ E +
Sbjct: 40  RYNGEIGDVVVGRITEAE 57



 Score = 27.9 bits (59), Expect = 2.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 64  VSIKLASERVNHSVASNNDPPRFYTPGEVITGIQDFMRGHG 186
           V  +L  +R + +  S ++P    TPG+VIT    +MR +G
Sbjct: 3   VDARLPCKRKSVASISVSEPKHIVTPGDVITEDTGYMRYNG 43


>SB_20037| Best HMM Match : 7tm_1 (HMM E-Value=3.09687e-43)
          Length = 453

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -3

Query: 291 FLQRNDSSMGECNKFIYFLHNPSNRCF*AIIFC 193
           FL +++S+M   N FIYF++N S R     +FC
Sbjct: 286 FLVQSNSAM---NFFIYFIYNESYRSIIRELFC 315


>SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 576

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 14/48 (29%), Positives = 18/48 (37%)
 Frame = -1

Query: 284 NVTTLQWANAISLFTFCITPATDAFRQSSSA*VPWPLIKSCIPVMTSP 141
           N T L W     +   C  P        +   +PWPLI+  I   T P
Sbjct: 469 NATALPWLLIEGVIVQCTLPLPPIQSVITRRALPWPLIQGVIVQCTLP 516


>SB_10833| Best HMM Match : RNase_PH_C (HMM E-Value=0.26)
          Length = 184

 Score = 25.8 bits (54), Expect = 8.8
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +3

Query: 264 PLKSRYVGEIGDVVVGRVLEVQQ 332
           PL    + E  DV  GRVLEVQQ
Sbjct: 150 PLTQDKLQECFDVTTGRVLEVQQ 172


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,459,108
Number of Sequences: 59808
Number of extensions: 164108
Number of successful extensions: 345
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 475580678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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