Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10699X
         (332 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.        27   0.19 
AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.        27   0.19 
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   4.0  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   4.0  

>AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 130 FYTPGEVITGIQDFMRGHGTYAEDDCLKASVAGVMQ 237
           F  PG V+   +D   G   Y+ DDC    V  V+Q
Sbjct: 14  FLLPGRVLYAQKDSEDGGSHYSSDDCQVTPVIHVLQ 49


>AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 130 FYTPGEVITGIQDFMRGHGTYAEDDCLKASVAGVMQ 237
           F  PG V+   +D   G   Y+ DDC    V  V+Q
Sbjct: 14  FLLPGRVLYAQKDSEDGGSHYSSDDCQVTPVIHVLQ 49


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 82  SERVNHSVASNNDPPRFYTPGEVITGIQD 168
           S+ + HS   + DP  ++TP     G +D
Sbjct: 26  SDPLGHSTPGSFDPQGYFTPPIANVGYRD 54


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +1

Query: 88   RVNHSVASNNDPPRFYTPGEVITGIQDFMRGHGTYAEDDC 207
            R  H V  +     F   GEV   +   + GHG + +D C
Sbjct: 916  RWTHRVIPDIAAWHFRRHGEVNFHLSQVLSGHGFFRDDLC 955


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 319,864
Number of Sequences: 2352
Number of extensions: 5294
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 23342418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)