Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10699X
(332 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U07561-1|AAB60392.1| 261|Homo sapiens unknown protein. 50 1e-06
BC000747-1|AAH00747.1| 293|Homo sapiens exosome component 2 pro... 50 1e-06
AL359092-9|CAM45750.1| 270|Homo sapiens exosome component 2 pro... 50 1e-06
AL359092-8|CAM45749.1| 263|Homo sapiens exosome component 2 pro... 50 1e-06
AL359092-7|CAM45748.1| 293|Homo sapiens exosome component 2 pro... 50 1e-06
AL359092-6|CAM45747.1| 285|Homo sapiens exosome component 2 pro... 50 1e-06
AL359092-5|CAM45746.1| 200|Homo sapiens exosome component 2 pro... 50 1e-06
AK022460-1|BAB14043.1| 293|Homo sapiens protein ( Homo sapiens ... 50 1e-06
AK001916-1|BAA91977.1| 293|Homo sapiens protein ( Homo sapiens ... 50 1e-06
BC022067-1|AAH22067.1| 195|Homo sapiens exosome component 1 pro... 31 1.1
AL355490-13|CAI40782.1| 195|Homo sapiens exosomal core protein ... 31 1.1
AL355490-12|CAI40779.1| 170|Homo sapiens exosomal core protein ... 31 1.1
AL355490-11|CAI40780.1| 178|Homo sapiens exosomal core protein ... 31 1.1
AL355490-10|CAI40781.1| 154|Homo sapiens exosomal core protein ... 31 1.1
AF151866-1|AAD34103.1| 195|Homo sapiens CGI-108 protein protein. 31 1.1
>U07561-1|AAB60392.1| 261|Homo sapiens unknown protein.
Length = 261
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/70 (42%), Positives = 40/70 (57%)
Frame = +1
Query: 46 LEMVSHVSIKLASERVNHSVASNNDPPRFYTPGEVITGIQDFMRGHGTYAEDDCLKASVA 225
+EM V+ K SER+ + PG+ IT FMRGHGTY ++ L ASVA
Sbjct: 1 MEMRLPVARKPLSERLGRDTKKH-----LVVPGDTITTDTGFMRGHGTYMGEEKLIASVA 55
Query: 226 GVMQKVNKLI 255
G +++VNKLI
Sbjct: 56 GSVERVNKLI 65
Score = 41.5 bits (93), Expect = 6e-04
Identities = 14/23 (60%), Positives = 21/23 (91%)
Frame = +3
Query: 255 CIRPLKSRYVGEIGDVVVGRVLE 323
C++ LK+RY+GE+GD+VVGR+ E
Sbjct: 66 CVKALKTRYIGEVGDIVVGRITE 88
>BC000747-1|AAH00747.1| 293|Homo sapiens exosome component 2
protein.
Length = 293
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/70 (42%), Positives = 40/70 (57%)
Frame = +1
Query: 46 LEMVSHVSIKLASERVNHSVASNNDPPRFYTPGEVITGIQDFMRGHGTYAEDDCLKASVA 225
+EM V+ K SER+ + PG+ IT FMRGHGTY ++ L ASVA
Sbjct: 3 MEMRLPVARKPLSERLGRDTKKH-----LVVPGDTITTDTGFMRGHGTYMGEEKLIASVA 57
Query: 226 GVMQKVNKLI 255
G +++VNKLI
Sbjct: 58 GSVERVNKLI 67
Score = 47.2 bits (107), Expect = 1e-05
Identities = 17/26 (65%), Positives = 24/26 (92%)
Frame = +3
Query: 255 CIRPLKSRYVGEIGDVVVGRVLEVQQ 332
C++ LK+RY+GE+GD+VVGR+ EVQQ
Sbjct: 68 CVKALKTRYIGEVGDIVVGRITEVQQ 93
>AL359092-9|CAM45750.1| 270|Homo sapiens exosome component 2
protein.
Length = 270
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/70 (42%), Positives = 40/70 (57%)
Frame = +1
Query: 46 LEMVSHVSIKLASERVNHSVASNNDPPRFYTPGEVITGIQDFMRGHGTYAEDDCLKASVA 225
+EM V+ K SER+ + PG+ IT FMRGHGTY ++ L ASVA
Sbjct: 3 MEMRLPVARKPLSERLGRDTKKH-----LVVPGDTITTDTGFMRGHGTYMGEEKLIASVA 57
Query: 226 GVMQKVNKLI 255
G +++VNKLI
Sbjct: 58 GSVERVNKLI 67
Score = 47.2 bits (107), Expect = 1e-05
Identities = 17/26 (65%), Positives = 24/26 (92%)
Frame = +3
Query: 255 CIRPLKSRYVGEIGDVVVGRVLEVQQ 332
C++ LK+RY+GE+GD+VVGR+ EVQQ
Sbjct: 68 CVKALKTRYIGEVGDIVVGRITEVQQ 93
>AL359092-8|CAM45749.1| 263|Homo sapiens exosome component 2
protein.
Length = 263
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/70 (42%), Positives = 40/70 (57%)
Frame = +1
Query: 46 LEMVSHVSIKLASERVNHSVASNNDPPRFYTPGEVITGIQDFMRGHGTYAEDDCLKASVA 225
+EM V+ K SER+ + PG+ IT FMRGHGTY ++ L ASVA
Sbjct: 3 MEMRLPVARKPLSERLGRDTKKH-----LVVPGDTITTDTGFMRGHGTYMGEEKLIASVA 57
Query: 226 GVMQKVNKLI 255
G +++VNKLI
Sbjct: 58 GSVERVNKLI 67
Score = 41.5 bits (93), Expect = 6e-04
Identities = 14/23 (60%), Positives = 21/23 (91%)
Frame = +3
Query: 255 CIRPLKSRYVGEIGDVVVGRVLE 323
C++ LK+RY+GE+GD+VVGR+ E
Sbjct: 68 CVKALKTRYIGEVGDIVVGRITE 90
>AL359092-7|CAM45748.1| 293|Homo sapiens exosome component 2
protein.
Length = 293
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/70 (42%), Positives = 40/70 (57%)
Frame = +1
Query: 46 LEMVSHVSIKLASERVNHSVASNNDPPRFYTPGEVITGIQDFMRGHGTYAEDDCLKASVA 225
+EM V+ K SER+ + PG+ IT FMRGHGTY ++ L ASVA
Sbjct: 3 MEMRLPVARKPLSERLGRDTKKH-----LVVPGDTITTDTGFMRGHGTYMGEEKLIASVA 57
Query: 226 GVMQKVNKLI 255
G +++VNKLI
Sbjct: 58 GSVERVNKLI 67
Score = 47.2 bits (107), Expect = 1e-05
Identities = 17/26 (65%), Positives = 24/26 (92%)
Frame = +3
Query: 255 CIRPLKSRYVGEIGDVVVGRVLEVQQ 332
C++ LK+RY+GE+GD+VVGR+ EVQQ
Sbjct: 68 CVKALKTRYIGEVGDIVVGRITEVQQ 93
>AL359092-6|CAM45747.1| 285|Homo sapiens exosome component 2
protein.
Length = 285
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/70 (42%), Positives = 40/70 (57%)
Frame = +1
Query: 46 LEMVSHVSIKLASERVNHSVASNNDPPRFYTPGEVITGIQDFMRGHGTYAEDDCLKASVA 225
+EM V+ K SER+ + PG+ IT FMRGHGTY ++ L ASVA
Sbjct: 3 MEMRLPVARKPLSERLGRDTKKH-----LVVPGDTITTDTGFMRGHGTYMGEEKLIASVA 57
Query: 226 GVMQKVNKLI 255
G +++VNKLI
Sbjct: 58 GSVERVNKLI 67
Score = 47.2 bits (107), Expect = 1e-05
Identities = 17/26 (65%), Positives = 24/26 (92%)
Frame = +3
Query: 255 CIRPLKSRYVGEIGDVVVGRVLEVQQ 332
C++ LK+RY+GE+GD+VVGR+ EVQQ
Sbjct: 68 CVKALKTRYIGEVGDIVVGRITEVQQ 93
>AL359092-5|CAM45746.1| 200|Homo sapiens exosome component 2
protein.
Length = 200
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/70 (42%), Positives = 40/70 (57%)
Frame = +1
Query: 46 LEMVSHVSIKLASERVNHSVASNNDPPRFYTPGEVITGIQDFMRGHGTYAEDDCLKASVA 225
+EM V+ K SER+ + PG+ IT FMRGHGTY ++ L ASVA
Sbjct: 3 MEMRLPVARKPLSERLGRDTKKH-----LVVPGDTITTDTGFMRGHGTYMGEEKLIASVA 57
Query: 226 GVMQKVNKLI 255
G +++VNKLI
Sbjct: 58 GSVERVNKLI 67
Score = 47.2 bits (107), Expect = 1e-05
Identities = 17/26 (65%), Positives = 24/26 (92%)
Frame = +3
Query: 255 CIRPLKSRYVGEIGDVVVGRVLEVQQ 332
C++ LK+RY+GE+GD+VVGR+ EVQQ
Sbjct: 68 CVKALKTRYIGEVGDIVVGRITEVQQ 93
>AK022460-1|BAB14043.1| 293|Homo sapiens protein ( Homo sapiens
cDNA FLJ12398 fis, clone MAMMA1002775. ).
Length = 293
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/70 (42%), Positives = 40/70 (57%)
Frame = +1
Query: 46 LEMVSHVSIKLASERVNHSVASNNDPPRFYTPGEVITGIQDFMRGHGTYAEDDCLKASVA 225
+EM V+ K SER+ + PG+ IT FMRGHGTY ++ L ASVA
Sbjct: 3 MEMRLPVARKPLSERLGRDTKKH-----LVVPGDTITTDTGFMRGHGTYMGEEKLIASVA 57
Query: 226 GVMQKVNKLI 255
G +++VNKLI
Sbjct: 58 GSVERVNKLI 67
Score = 47.2 bits (107), Expect = 1e-05
Identities = 17/26 (65%), Positives = 24/26 (92%)
Frame = +3
Query: 255 CIRPLKSRYVGEIGDVVVGRVLEVQQ 332
C++ LK+RY+GE+GD+VVGR+ EVQQ
Sbjct: 68 CVKALKTRYIGEVGDIVVGRITEVQQ 93
>AK001916-1|BAA91977.1| 293|Homo sapiens protein ( Homo sapiens
cDNA FLJ11054 fis, clone PLACE1004672. ).
Length = 293
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/70 (42%), Positives = 40/70 (57%)
Frame = +1
Query: 46 LEMVSHVSIKLASERVNHSVASNNDPPRFYTPGEVITGIQDFMRGHGTYAEDDCLKASVA 225
+EM V+ K SER+ + PG+ IT FMRGHGTY ++ L ASVA
Sbjct: 3 MEMRLPVARKPLSERLGRDTKKH-----LVVPGDTITTDTGFMRGHGTYMGEEKLIASVA 57
Query: 226 GVMQKVNKLI 255
G +++VNKLI
Sbjct: 58 GSVERVNKLI 67
Score = 47.2 bits (107), Expect = 1e-05
Identities = 17/26 (65%), Positives = 24/26 (92%)
Frame = +3
Query: 255 CIRPLKSRYVGEIGDVVVGRVLEVQQ 332
C++ LK+RY+GE+GD+VVGR+ EVQQ
Sbjct: 68 CVKALKTRYIGEVGDIVVGRITEVQQ 93
>BC022067-1|AAH22067.1| 195|Homo sapiens exosome component 1
protein.
Length = 195
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 121 PPRFYTPGEVITGIQDFMRGHGTYAEDDCLKASVAGVMQK 240
P R+ PGE + +++ G GTY + +S+AG + K
Sbjct: 4 PVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMK 43
>AL355490-13|CAI40782.1| 195|Homo sapiens exosomal core protein
CSL4 protein.
Length = 195
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 121 PPRFYTPGEVITGIQDFMRGHGTYAEDDCLKASVAGVMQK 240
P R+ PGE + +++ G GTY + +S+AG + K
Sbjct: 4 PVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMK 43
>AL355490-12|CAI40779.1| 170|Homo sapiens exosomal core protein
CSL4 protein.
Length = 170
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 121 PPRFYTPGEVITGIQDFMRGHGTYAEDDCLKASVAGVMQK 240
P R+ PGE + +++ G GTY + +S+AG + K
Sbjct: 4 PVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMK 43
>AL355490-11|CAI40780.1| 178|Homo sapiens exosomal core protein
CSL4 protein.
Length = 178
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 121 PPRFYTPGEVITGIQDFMRGHGTYAEDDCLKASVAGVMQK 240
P R+ PGE + +++ G GTY + +S+AG + K
Sbjct: 4 PVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMK 43
>AL355490-10|CAI40781.1| 154|Homo sapiens exosomal core protein
CSL4 protein.
Length = 154
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 121 PPRFYTPGEVITGIQDFMRGHGTYAEDDCLKASVAGVMQK 240
P R+ PGE + +++ G GTY + +S+AG + K
Sbjct: 4 PVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMK 43
>AF151866-1|AAD34103.1| 195|Homo sapiens CGI-108 protein protein.
Length = 195
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 121 PPRFYTPGEVITGIQDFMRGHGTYAEDDCLKASVAGVMQK 240
P R+ PGE + +++ G GTY + +S+AG + K
Sbjct: 4 PVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMK 43
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,579,669
Number of Sequences: 237096
Number of extensions: 800231
Number of successful extensions: 1316
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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