Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10699X
         (332 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118465-1|AAM49834.1|  298|Drosophila melanogaster GM02257p pro...    74   4e-14
AE013599-3629|AAF47028.1|  298|Drosophila melanogaster CG3931-PA...    74   4e-14
AE014134-2919|AAF53661.1|  446|Drosophila melanogaster CG15157-P...    28   2.5  
AY069535-1|AAL39680.1| 1040|Drosophila melanogaster LD25753p pro...    27   7.8  
AE014297-2839|AAN14361.2| 1040|Drosophila melanogaster CG4058-PA...    27   7.8  
AE014297-2838|AAG22165.3|  978|Drosophila melanogaster CG4058-PB...    27   7.8  

>AY118465-1|AAM49834.1|  298|Drosophila melanogaster GM02257p
           protein.
          Length = 298

 Score = 74.1 bits (174), Expect = 4e-14
 Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
 Frame = +1

Query: 52  MVSHVSIKLASERVNHS--VASNNDPPRFYTPGEVITGIQDFMRGHGTYAEDDCLKASVA 225
           M ++ +I LA +RV+     A   + PR YTPGEV+     FMRGHGT+ ED+ +K+SVA
Sbjct: 1   MSTNAAIDLALDRVDWRDLAAQTEEQPRVYTPGEVLMPEAGFMRGHGTFVEDENIKSSVA 60

Query: 226 GVMQKVNKLIA 258
           GV+QKVNKLI+
Sbjct: 61  GVIQKVNKLIS 71



 Score = 48.0 bits (109), Expect = 3e-06
 Identities = 22/25 (88%), Positives = 23/25 (92%)
 Frame = +3

Query: 258 IRPLKSRYVGEIGDVVVGRVLEVQQ 332
           +RPLKSRYVGEIGDVVV RV EVQQ
Sbjct: 72  VRPLKSRYVGEIGDVVVARVSEVQQ 96


>AE013599-3629|AAF47028.1|  298|Drosophila melanogaster CG3931-PA
           protein.
          Length = 298

 Score = 74.1 bits (174), Expect = 4e-14
 Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
 Frame = +1

Query: 52  MVSHVSIKLASERVNHS--VASNNDPPRFYTPGEVITGIQDFMRGHGTYAEDDCLKASVA 225
           M ++ +I LA +RV+     A   + PR YTPGEV+     FMRGHGT+ ED+ +K+SVA
Sbjct: 1   MSTNAAIDLALDRVDWRDLAAQTEEQPRVYTPGEVLMPEAGFMRGHGTFVEDENIKSSVA 60

Query: 226 GVMQKVNKLIA 258
           GV+QKVNKLI+
Sbjct: 61  GVIQKVNKLIS 71



 Score = 48.0 bits (109), Expect = 3e-06
 Identities = 22/25 (88%), Positives = 23/25 (92%)
 Frame = +3

Query: 258 IRPLKSRYVGEIGDVVVGRVLEVQQ 332
           +RPLKSRYVGEIGDVVV RV EVQQ
Sbjct: 72  VRPLKSRYVGEIGDVVVARVSEVQQ 96


>AE014134-2919|AAF53661.1|  446|Drosophila melanogaster CG15157-PA
           protein.
          Length = 446

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 254 LHSPIEESLRWRNRRCGSRKSIGSST 331
           LHS +   + W++R+C SR S  S T
Sbjct: 412 LHSSVTSIMPWKHRQCPSRGSSSSGT 437


>AY069535-1|AAL39680.1| 1040|Drosophila melanogaster LD25753p
           protein.
          Length = 1040

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +1

Query: 1   VVHNSQLAKRELKKTLEMVSHVSIKLASERVNHSVASNNDPPRFYTPGEV 150
           + H+ Q A R++ KT + +   + +LA E+VN        P     P E+
Sbjct: 732 MTHDLQQAFRDILKTTDWLDDTTKQLAEEKVNAMSLKIGYPDFILNPSEL 781


>AE014297-2839|AAN14361.2| 1040|Drosophila melanogaster CG4058-PA,
           isoform A protein.
          Length = 1040

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +1

Query: 1   VVHNSQLAKRELKKTLEMVSHVSIKLASERVNHSVASNNDPPRFYTPGEV 150
           + H+ Q A R++ KT + +   + +LA E+VN        P     P E+
Sbjct: 732 MTHDLQQAFRDILKTTDWLDDTTKQLAEEKVNAMSLKIGYPDFILNPSEL 781


>AE014297-2838|AAG22165.3|  978|Drosophila melanogaster CG4058-PB,
           isoform B protein.
          Length = 978

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +1

Query: 1   VVHNSQLAKRELKKTLEMVSHVSIKLASERVNHSVASNNDPPRFYTPGEV 150
           + H+ Q A R++ KT + +   + +LA E+VN        P     P E+
Sbjct: 670 MTHDLQQAFRDILKTTDWLDDTTKQLAEEKVNAMSLKIGYPDFILNPSEL 719


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,613,315
Number of Sequences: 53049
Number of extensions: 241075
Number of successful extensions: 493
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 735339255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)