Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10697X
(450 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36312| Best HMM Match : Ion_trans (HMM E-Value=0) 49 2e-06
SB_31615| Best HMM Match : GCC2_GCC3 (HMM E-Value=0.053) 32 0.19
SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46) 32 0.25
SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05) 31 0.44
SB_31412| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_19088| Best HMM Match : PSGP (HMM E-Value=2.5) 29 1.3
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 29 1.8
SB_39611| Best HMM Match : TEP1_N (HMM E-Value=0.67) 29 2.3
SB_56054| Best HMM Match : rve (HMM E-Value=0.011) 28 3.1
SB_9402| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_8478| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_24227| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_37662| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_10762| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33) 27 7.2
SB_4922| Best HMM Match : CXC (HMM E-Value=0.013) 27 7.2
SB_51217| Best HMM Match : TUDOR (HMM E-Value=0) 27 7.2
SB_46610| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_46270| Best HMM Match : rve (HMM E-Value=1.2e-09) 27 7.2
SB_15486| Best HMM Match : rve (HMM E-Value=1.2e-09) 27 7.2
SB_59217| Best HMM Match : TRAUB (HMM E-Value=0.25) 27 9.5
SB_44868| Best HMM Match : Radial_spoke (HMM E-Value=0) 27 9.5
SB_49003| Best HMM Match : Lectin_C (HMM E-Value=1e-09) 27 9.5
SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_36312| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1283
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/50 (40%), Positives = 34/50 (68%)
Frame = +3
Query: 291 DADNFEPKLPTTLAASNKWEGEDEDDNVKESWEDEEVAKNRRRKD*GSDT 440
D + FEP ++KWEGEDEDD++KESW+D++ ++ +++D +T
Sbjct: 1097 DDEKFEPGEVPADGVTDKWEGEDEDDDIKESWDDDD--EDEKKEDEAKNT 1144
>SB_31615| Best HMM Match : GCC2_GCC3 (HMM E-Value=0.053)
Length = 870
Score = 32.3 bits (70), Expect = 0.19
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +3
Query: 252 GADSGVLKMDVS-WDADNFEPKLPTTLAA-SNKWEGEDEDDNVKESWEDEEVAKNRRRK 422
G D G L M+ + D E +L + +N +GEDED+ + E +DE+ + +R+K
Sbjct: 807 GPDFGGLSMEEAVGDLGILEVELEEPVVEQTNPIDGEDEDEEILEEQQDEDAKRVKRKK 865
>SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1229
Score = 31.9 bits (69), Expect = 0.25
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 298 SASHDTSIFRTPESAPN*YENFSPEH-QNRTTIDSDLSLTRCLQSRRFLDNNKTQV 134
S ++T++ P + SP + N TT+DS +SLTR L S + + T +
Sbjct: 507 SVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSLLSTTLIPSISTSI 562
Score = 31.9 bits (69), Expect = 0.25
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 298 SASHDTSIFRTPESAPN*YENFSPEH-QNRTTIDSDLSLTRCLQSRRFLDNNKTQV 134
S ++T++ P + SP + N TT+DS +SLTR L S + + T +
Sbjct: 708 SVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSLLSTTLIPSISTSI 763
Score = 30.3 bits (65), Expect = 0.77
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -3
Query: 331 ANVVGSLGSKLSASHDTSIFRTPESAPN*YENFSPEH-QNRTTIDSDLSLTRCLQSRRFL 155
AN+ L S S ++T++ P + SP + N TT+DS +SLTR S +
Sbjct: 95 ANITMILPST-SVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSLSTTLI 153
Query: 154 DNNKTQV 134
+ T +
Sbjct: 154 PSISTSI 160
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 298 SASHDTSIFRTPESAPN*YENFSPEH-QNRTTIDSDLSLTRCLQSRRFLDNNKTQV 134
S ++T++ P + SP + N TT+DS +SLTR S + + T +
Sbjct: 306 SVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSLSTTLIPSISTSI 361
>SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46)
Length = 572
Score = 31.9 bits (69), Expect = 0.25
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 298 SASHDTSIFRTPESAPN*YENFSPEH-QNRTTIDSDLSLTRCLQSRRFLDNNKTQV 134
S ++T++ P + SP + N TT+DS +SLTR L S + + T +
Sbjct: 490 SVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSLLSTTLIPSISTSI 545
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 298 SASHDTSIFRTPESAPN*YENFSPEH-QNRTTIDSDLSLTRCLQSRRFLDNNKTQV 134
S ++T++ P + SP + N TT+DS +SLTR S + + T +
Sbjct: 88 SVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSLSTTLIPSISTSI 143
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 298 SASHDTSIFRTPESAPN*YENFSPEH-QNRTTIDSDLSLTRCLQSRRFLDNNKTQV 134
S ++T++ P + SP + N TT+DS +SLTR S + + T +
Sbjct: 289 SVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSLSTTLIPSISTSI 344
>SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05)
Length = 1960
Score = 31.1 bits (67), Expect = 0.44
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 298 SASHDTSIFRTPESAPN*YENFSPEH-QNRTTIDSDLSLTRCLQSRRFLDNNKTQV 134
S ++T+ P + SP + N TT+DS +SLTR L S + + T +
Sbjct: 708 SVPYNTTFIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSLLSTTLIPSISTSI 763
Score = 31.1 bits (67), Expect = 0.44
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 298 SASHDTSIFRTPESAPN*YENFSPEH-QNRTTIDSDLSLTRCLQSRRFLDNNKTQV 134
S ++T++ P + SP + N TT+DS +SLTR L S + + T +
Sbjct: 1110 SVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSLLSTTLIPSISTSM 1165
Score = 30.7 bits (66), Expect = 0.58
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 298 SASHDTSIFRTPESAPN*YENFSPEH-QNRTTIDSDLSLTRCLQSRRFLDNNKTQV 134
S ++T++ P + SP + N TT+DS +SLTR L S + + T +
Sbjct: 909 SVPYNTTLIPGPNATSTAATTMSPTYVANMTTLDSSVSLTRSLLSTTLIPSISTSI 964
Score = 30.3 bits (65), Expect = 0.77
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 298 SASHDTSIFRTPESAPN*YENFSPEH-QNRTTIDSDLSLTRCLQSRRFLDNNKTQV 134
S ++T P + SP + N TT+DS +SLTR L S + + T +
Sbjct: 1713 SVPYNTMFIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSLLSTTLIPSISTSI 1768
Score = 29.9 bits (64), Expect = 1.0
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 298 SASHDTSIFRTPESAPN*YENFSPEH-QNRTTIDSDLSLTRCLQS 167
S ++T++ P + SP + N TT+DS +SLTR L S
Sbjct: 1914 SVPYNTTLIPAPNATSTAATKMSPSYVANMTTLDSSVSLTRSLLS 1958
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 298 SASHDTSIFRTPESAPN*YENFSPEH-QNRTTIDSDLSLTRCLQSRRFLDNNKTQV 134
S ++T++ P + SP + N TT+DS +SLTR S + + T +
Sbjct: 105 SVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSLSTTLIPSISTSI 160
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 298 SASHDTSIFRTPESAPN*YENFSPEH-QNRTTIDSDLSLTRCLQSRRFLDNNKTQV 134
S ++T++ P + SP + N TT+DS +SLTR S + + T +
Sbjct: 306 SVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSLSTTLIPSISTSI 361
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 298 SASHDTSIFRTPESAPN*YENFSPEH-QNRTTIDSDLSLTRCLQSRRFLDNNKTQV 134
S ++T++ P + SP + N TT+DS +SLTR S + + +T +
Sbjct: 1512 SVPYNTTLIPGPNATSTAATTMSPSYVANMTTLDSTVSLTRSSLSTTLIPSIRTSI 1567
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 298 SASHDTSIFRTPESAPN*YENFSPEH-QNRTTIDSDLSLTRCLQSRRFLDNNKTQV 134
S ++T++ P + SP + N TT+DS +SLTR S + + T +
Sbjct: 1311 SVPYNTTLIPGPNATSTAATTMSPSYVANMTTLDSSVSLTRSSLSTTLIPSISTSI 1366
>SB_31412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 909
Score = 31.1 bits (67), Expect = 0.44
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 291 DADNFEPKLPTTLAASNKWEGEDEDDNVKESWEDEEVAK 407
DA ++ T L ++ E ED+DD + WE+E++ K
Sbjct: 249 DARKKREEVRTALVRGDENEEEDDDDEETKRWEEEQIRK 287
>SB_19088| Best HMM Match : PSGP (HMM E-Value=2.5)
Length = 737
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 298 SASHDTSIFRTPESAPN*YENFSPEH-QNRTTIDSDLSLTRCLQSRRFLDNNKTQV 134
S ++T++ P + SP + N TT+DS +SLTR S + + T +
Sbjct: 417 SVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSLSTTLIPSISTSI 472
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 298 SASHDTSIFRTPESAPN*YENFSPEH-QNRTTIDSDLSLTRCLQSRRFLDNNKTQV 134
S ++T++ P + SP + N TT+DS +SLTR S + + T +
Sbjct: 618 SVPYNTTLIPAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSLSTTLIPSISTSI 673
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 298 SASHDTSIFRTPESAPN*YENFSPEH-QNRTTIDSDLSLTRCLQSRRFLDNNKTQV 134
S ++T++ P + SP + N TT+DS +SLTR S + + T +
Sbjct: 216 SVPYNTTLIPGPNATSTAATTMSPSYVANMTTLDSSVSLTRSSLSTTLIPSISTSI 271
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 29.1 bits (62), Expect = 1.8
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Frame = +3
Query: 120 SLKNYT*VLLLSRK-RRLWRHLVSDKSLSIVVRFWCSGEKFSY*FGADSGVLKMDVSWDA 296
++KN T V++ K +++ V+ +L+ V G+K S F + K++ + D+
Sbjct: 1805 NVKNMTNVIIQDEKGNTIFKGPVNVATLNETVVKNGGGDKAS--FKLEKAGYKVEENTDS 1862
Query: 297 DNF---EPKLPTTLAASNKWEGEDEDDNVKESWEDEEVAKNRRRKD 425
E L T K E E+EDD ++ E+EE K +++K+
Sbjct: 1863 LGMAVIEKSLQKTFHPKKK-ENEEEDDKKEKKEENEEEEKKKKKKE 1907
>SB_39611| Best HMM Match : TEP1_N (HMM E-Value=0.67)
Length = 565
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 285 TRPFLGLQNQRRINMKTFHLNTKIGQLST 199
T+PF+GL +RR+ + TF L K ST
Sbjct: 513 TKPFVGLTGRRRLTLITFELFRKKSLTST 541
>SB_56054| Best HMM Match : rve (HMM E-Value=0.011)
Length = 372
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 312 KLPTTLAASNKWEGEDEDDNVKESWEDEEVAKNRRRKD*GSD 437
++P L W+ +DE D+ E E E K+R++ SD
Sbjct: 284 EIPPELQEWQMWQSKDEQDDFNEPEEKPEKIKSRKKTKSKSD 325
>SB_9402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 249 FGADSGVLKMDVSWDADNFEPKLPTTLAASNKW 347
FG S LK++V D DN+ L T+ +W
Sbjct: 155 FGQQSTTLKLNVLSDRDNYHVVLVPTIPCPGRW 187
>SB_8478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 291 DADNFEPKLPTTLAASNKWEGEDEDDNVKESWEDEEVAKNRRRKD 425
D D E + + + E E+E++ KES+ + +V R+KD
Sbjct: 827 DTDGEEAEKVVVIESDTSDEEEEEEEESKESYNELDVISLTRKKD 871
>SB_24227| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -3
Query: 241 ENFSPEHQNRTTIDSDLSLTRCLQSRRFLDNNKTQV*F 128
EN + +N+ ++ D +TR Q R+LD K+Q+ F
Sbjct: 192 ENIIEDTKNKVKLNEDDFITRKKQLERYLDVTKSQMLF 229
>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1414
Score = 27.1 bits (57), Expect = 7.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 354 EDEDDNVKESWEDEEVAKNRRRKD 425
++ED V + WE +EV K RR++
Sbjct: 144 DEEDAAVDDGWEGKEVRKEARRQE 167
>SB_37662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 433
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 354 EDEDDNVKESWEDEEVAKNRRRKD*GSD 437
+D+DD ES E E + RR+ + GSD
Sbjct: 51 DDDDDEGNESDEGSEPSNKRRKTEDGSD 78
>SB_10762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 647
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 318 PTTLAASNKWEGEDEDDNVKESWEDEEVAKNRRRK 422
P A SNK G+ E+DN KE +D + +RK
Sbjct: 585 PKDTAQSNKRYGKGENDNSKEQIDDGMASPPLQRK 619
>SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33)
Length = 693
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 306 EPKLPTTLAASNKWEGEDED-DNVKESWEDEEVAKNRRRKD*GSDTSTT 449
EPK T L K E E E+ + +ES E+EE K + + DTS T
Sbjct: 236 EPKELTELKEKIKAEAEAENQEEGEESEEEEEEEKPATQNEAKQDTSAT 284
>SB_4922| Best HMM Match : CXC (HMM E-Value=0.013)
Length = 600
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 312 KLPTTLAASNKWEGEDEDDNVKESWEDEEVA 404
+LP+TLA SN WEG+ DN + + +A
Sbjct: 78 QLPSTLA-SNAWEGKRRTDNWSNITQTKPIA 107
>SB_51217| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 652
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 109 KSSSV*RITLEFCCCLENDDSGDIL*V-ISHCR*LSDFGVQVKSF 240
K SV + L FC D G + V +SH L DF VQ+KSF
Sbjct: 38 KGGSVKTVEL-FCLTSRMPDIGTTVEVYVSHINNLDDFYVQLKSF 81
>SB_46610| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 295 QITSSPNSRPRWQPPTNGKGKTRMIT*RKAGRM 393
QIT+S PR + PT K T+ ++ R GR+
Sbjct: 99 QITTSSEFEPRAKVPTKAKVPTKSLSDRFGGRL 131
>SB_46270| Best HMM Match : rve (HMM E-Value=1.2e-09)
Length = 657
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 309 PKLPTTLAASNKWEGEDEDDNVKESWED 392
P PTT+ A K E E+E+D+ +S +D
Sbjct: 48 PPTPTTVRARKKEEYEEEEDDDDDSEDD 75
>SB_15486| Best HMM Match : rve (HMM E-Value=1.2e-09)
Length = 662
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 309 PKLPTTLAASNKWEGEDEDDNVKESWED 392
P PTT+ A K E E+E+D+ +S +D
Sbjct: 48 PPTPTTVRARKKEEYEEEEDDDDDSEDD 75
>SB_59217| Best HMM Match : TRAUB (HMM E-Value=0.25)
Length = 626
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 273 KMDVSWDADNFEPKLPTTLAASNKWEGEDEDDNVKESWEDEE 398
++ V + + FEP + AAS + E ++ D +K+ ++E+
Sbjct: 555 QIPVVMENNTFEPSMEEEKAASEEQEDDEVSDTLKDVQDEED 596
>SB_44868| Best HMM Match : Radial_spoke (HMM E-Value=0)
Length = 375
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 348 EGEDEDDNVKESWEDEEVAK 407
EGE+E+ +E+ EDEEVA+
Sbjct: 73 EGEEEEKEKEENEEDEEVAE 92
>SB_49003| Best HMM Match : Lectin_C (HMM E-Value=1e-09)
Length = 130
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 262 ESAPN*YENFSPEHQNRTTIDSDLSLTRCLQSRRFLD 152
+S P Y+NF+P H N D+D + R ++ D
Sbjct: 79 DSEPASYQNFAPGHPNSPGDDTDCVVARDSDEGKWAD 115
>SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 348 EGEDEDDNVKESWEDEEVAKNRRRK 422
E E+E++ +E E+EE K RR+K
Sbjct: 242 EEEEEEEEEEEEEEEEEEEKRRRKK 266
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,134,098
Number of Sequences: 59808
Number of extensions: 290349
Number of successful extensions: 1147
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 896151577
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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