Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10697X
         (450 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039711-2|AAB96710.1|  416|Caenorhabditis elegans Hypothetical ...    30   0.68 
AL034488-12|CAD31697.1|  450|Caenorhabditis elegans Hypothetical...    29   2.1  
Z93385-5|CAB07639.1|  734|Caenorhabditis elegans Hypothetical pr...    27   4.8  
AF016687-5|AAC48093.1|  709|Caenorhabditis elegans Hypothetical ...    27   4.8  
U40800-4|AAO91742.1|  763|Caenorhabditis elegans Hypothetical pr...    27   6.3  
Z81523-2|CAB04248.1|  928|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z81523-1|CAB04241.1|  944|Caenorhabditis elegans Hypothetical pr...    27   8.3  
AF101312-4|AAC69220.1|  358|Caenorhabditis elegans Hypothetical ...    27   8.3  

>AF039711-2|AAB96710.1|  416|Caenorhabditis elegans Hypothetical
           protein F49D11.4 protein.
          Length = 416

 Score = 30.3 bits (65), Expect = 0.68
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 165 RLWRHLVSDKSLSIVVRFWCSGE 233
           RLWRH  + K L+ V+R W S +
Sbjct: 311 RLWRHSFTPKGLNQVIRLWLSSD 333


>AL034488-12|CAD31697.1|  450|Caenorhabditis elegans Hypothetical
           protein Y54G11A.14 protein.
          Length = 450

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 333 ASNKWEGEDEDDNVKESWEDEEVAKNR 413
           A ++ E ++E++ VKE  EDEEV + R
Sbjct: 73  AEDEAEDDEENEEVKEEKEDEEVVEER 99


>Z93385-5|CAB07639.1|  734|Caenorhabditis elegans Hypothetical
           protein M01E5.5b protein.
          Length = 734

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
 Frame = +3

Query: 273 KMDVSWDA-DNFEPKLPTTLAASNK--WEGEDEDDNVKESWEDEEVAKNRRRKD*GSDTS 443
           K DV  D+ D+++P+   +   + K   E  ++DD   E    EE  K ++RK  G++ S
Sbjct: 84  KKDVGSDSEDDYKPEKKKSKKNNKKKAQESSEDDDEESEGDVSEEDVKPQKRKSKGAEKS 143


>AF016687-5|AAC48093.1|  709|Caenorhabditis elegans Hypothetical
           protein T21D12.11 protein.
          Length = 709

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
 Frame = -1

Query: 252 RINMKTFHLNTKIGQLSTVTY--HSQDVSRVVVF*TTTKLKCNSSN*RRFSAIITVGLKN 79
           +++   F   T++   S  T    S + +RV+ F T+T+L+  S          TVG   
Sbjct: 638 KLSTTLFFEETQVTSTSDFTSSPRSIETTRVIEFDTSTELQTTSKTSTTTEDTTTVGTTT 697

Query: 78  NEQMT*YWR 52
             +M  +WR
Sbjct: 698 EMEMRRFWR 706


>U40800-4|AAO91742.1|  763|Caenorhabditis elegans Hypothetical
           protein D2096.12 protein.
          Length = 763

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 336 SNKWEGEDEDDNVKESWEDEEVAKNRRRKD*GSDTST 446
           S K + E+E+D   + W D  +A+N RR +    T T
Sbjct: 454 SVKKDEENEEDGDDQDWIDHHLARNFRRLECRKKTDT 490


>Z81523-2|CAB04248.1|  928|Caenorhabditis elegans Hypothetical
           protein F32H2.1b protein.
          Length = 928

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +3

Query: 282 VSWDA-DNFEPK-LPTTLAASNKWEGEDEDDNVKESWEDEEVAK 407
           V W A  NF+ K   T  A  +KW  E      KE W +EEV K
Sbjct: 217 VPWTAIANFDFKGSRTEWAVKSKWYNELNPKWNKEHWSNEEVEK 260


>Z81523-1|CAB04241.1|  944|Caenorhabditis elegans Hypothetical
           protein F32H2.1a protein.
          Length = 944

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +3

Query: 282 VSWDA-DNFEPK-LPTTLAASNKWEGEDEDDNVKESWEDEEVAK 407
           V W A  NF+ K   T  A  +KW  E      KE W +EEV K
Sbjct: 217 VPWTAIANFDFKGSRTEWAVKSKWYNELNPKWNKEHWSNEEVEK 260


>AF101312-4|AAC69220.1|  358|Caenorhabditis elegans Hypothetical
           protein F56E10.1 protein.
          Length = 358

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +3

Query: 279 DVSWDADNFEPKLPTTLAASNKWEGEDEDDNVKESWEDEEVAKNRRRKD*GSDTS 443
           D S D +N    L +     +   GE+++DN ++S E++E   +    +  SD+S
Sbjct: 21  DESSDGENSVIILDSDTEPEDGAGGEEDEDNGEDSEEEDEEDSDEEESEDDSDSS 75


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,634,997
Number of Sequences: 27780
Number of extensions: 223847
Number of successful extensions: 1063
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)