Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10697X
(450 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g37475.1 68418.m04510 translation initiation factor-related s... 46 2e-05
At1g66070.1 68414.m07499 translation initiation factor-related s... 37 0.005
At5g25590.1 68418.m03045 expressed protein contains Pfam profile... 28 2.5
At3g44300.1 68416.m04757 nitrilase 2 (NIT2) identical to SP|P329... 28 2.5
At3g21160.1 68416.m02673 mannosyl-oligosaccharide 1,2-alpha-mann... 28 2.5
At4g14480.1 68417.m02233 protein kinase family protein contains ... 28 3.4
At1g61840.1 68414.m06978 DC1 domain-containing protein similar t... 28 3.4
At3g44320.1 68416.m04760 nitrilase 3 (NIT3) identical to SP|P460... 27 4.4
At1g73440.1 68414.m08501 calmodulin-related low similarity to ca... 27 4.4
At1g51590.1 68414.m05808 mannosyl-oligosaccharide 1,2-alpha-mann... 27 4.4
At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger) fa... 27 5.9
At5g19630.1 68418.m02336 expressed protein 27 5.9
At5g11140.1 68418.m01302 hypothetical protein 27 5.9
At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEME... 27 5.9
At3g50590.1 68416.m05533 transducin family protein / WD-40 repea... 27 5.9
At3g45555.1 68416.m04920 zinc finger (C3HC4-type RING finger) fa... 27 5.9
At3g44310.1 68416.m04758 nitrilase 1 (NIT1) identical to SP|P329... 27 5.9
At5g56950.1 68418.m07109 nucleosome assembly protein (NAP), puta... 27 7.7
At5g35794.1 68418.m04297 hypothetical protein contains Pfam prof... 27 7.7
At4g17940.1 68417.m02672 expressed protein 27 7.7
At3g45510.1 68416.m04914 zinc finger (C3HC4-type RING finger) fa... 27 7.7
At3g19810.1 68416.m02509 expressed protein contains Pfam PF02620... 27 7.7
At3g17170.1 68416.m02190 ribosomal protein S6 family protein (RF... 27 7.7
At3g16180.1 68416.m02043 proton-dependent oligopeptide transport... 27 7.7
At2g40540.1 68415.m05002 potassium transporter, putative (KT2) i... 27 7.7
At1g56510.1 68414.m06498 disease resistance protein (TIR-NBS-LRR... 27 7.7
At1g03010.1 68414.m00273 phototropic-responsive NPH3 family prot... 27 7.7
>At5g37475.1 68418.m04510 translation initiation factor-related
similar to Eukaryotic translation initiation factor 3
subunit 1 (eIF-3 alpha) (eIF3 p35) (eIF3j)
(Swiss-Prot:O75822) [Homo sapiens]
Length = 225
Score = 45.6 bits (103), Expect = 2e-05
Identities = 17/40 (42%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = +3
Query: 288 WDADNFEPKLPTTLAASNKWEGEDEDDN-VKESWEDEEVA 404
W+A++F+P LP+ + + W+ ED D+N +K+SWE+E+V+
Sbjct: 4 WEAEDFQP-LPSKVELKSNWDDEDVDENDIKDSWEEEDVS 42
>At1g66070.1 68414.m07499 translation initiation factor-related
similar to Eukaryotic translation initiation factor 3
subunit 1 (eIF-3 alpha) (eIF3 p35) (eIF3j)
(Swiss-Prot:O75822) [Homo sapiens]
Length = 226
Score = 37.1 bits (82), Expect = 0.005
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 288 WDADNFEPKLPTTLAASNKWEGEDEDDN-VKESWEDEE 398
W+ + P LP + + W+ ED D+N +K+SWED++
Sbjct: 4 WEDEKIAP-LPAKVELKSNWDDEDVDENEIKDSWEDDD 40
>At5g25590.1 68418.m03045 expressed protein contains Pfam profile
PF04783: Protein of unknown function (DUF630)
Length = 775
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 297 DNFEPKLPTTLAASNKWEGEDEDDNVKESWEDEEVAKNRRRK 422
+ EPK P + + E E+ED+ +E E+E V + +++K
Sbjct: 258 EEMEPKTPEKVEEEEE-EDEEEDEEEEEEEEEEVVVEVKKKK 298
>At3g44300.1 68416.m04757 nitrilase 2 (NIT2) identical to SP|P32962
Nitrilase 2 (EC 3.5.5.1) {Arabidopsis thaliana}
Length = 339
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 365 ILVFPFPFVGGCQRGREFGLEV 300
++VFP F+GG RG FGL V
Sbjct: 53 LVVFPEAFIGGYPRGFRFGLGV 74
>At3g21160.1 68416.m02673 mannosyl-oligosaccharide
1,2-alpha-mannosidase, putative similar to
mannosyl-oligosaccharide 1,2-alpha-mannosidase [Glycine
max][GI:6552504]
Length = 572
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 270 LKMDVSWDADNFEPKLPTTLAASNKWEGEDEDDNVKESW 386
L +++W NF PT LA N + D +V SW
Sbjct: 402 LAEELAWTCYNFYQSTPTKLAGENYFFNSGSDMSVGTSW 440
>At4g14480.1 68417.m02233 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 487
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 363 DDNVKESWEDEEVAKNRR 416
DD+ +E EDEE+ KNRR
Sbjct: 329 DDDEEEEEEDEEIVKNRR 346
>At1g61840.1 68414.m06978 DC1 domain-containing protein similar to
hypothetical protein GI:3184279 from [Arabidopsis
thaliana]; contains Pfam profile PF03107: DC1 domain
Length = 814
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 186 SDKSLSIVVRFWCSGEKFSY*FGAD 260
SD+ LS++ FWC+ ++F+ G D
Sbjct: 278 SDEDLSVLPLFWCNNKEFNVDGGCD 302
>At3g44320.1 68416.m04760 nitrilase 3 (NIT3) identical to SP|P46010
Nitrilase 3 (EC 3.5.5.1) {Arabidopsis thaliana}
Length = 346
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 365 ILVFPFPFVGGCQRGREFGLEV 300
+++FP F+GG RG FGL V
Sbjct: 60 LVLFPEAFIGGYPRGFRFGLAV 81
>At1g73440.1 68414.m08501 calmodulin-related low similarity to
calmodulin 8 [Arabidopsis thaliana] GI:5825600; contains
Pfam profiles PF02809: Ubiquitin interaction motif,
PF00036: EF hand
Length = 254
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 348 EGEDEDDNVKESWEDEEVAKNRRRK 422
+G+++DD V+E EDEE R+ K
Sbjct: 94 DGDEDDDEVEEIDEDEEFLCKRKNK 118
>At1g51590.1 68414.m05808 mannosyl-oligosaccharide
1,2-alpha-mannosidase, putative similar to
mannosyl-oligosaccharide 1,2-alpha-mannosidase [Glycine
max][GI:6552504]
Length = 560
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 279 DVSWDADNFEPKLPTTLAASNKWEGEDEDDNVKESW 386
+++W NF PT LA N + +D +V SW
Sbjct: 404 ELAWTCYNFYQSTPTKLAGENYFFTAGQDMSVGTSW 439
>At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger)
family protein contains similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 486
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +3
Query: 291 DADNFEPKLPTTLAASNKWEGEDEDDNVKESWEDEEVAKNRRRKD*GSDTS 443
D D+ E + A E E+E++ +E E+EE +K R D S
Sbjct: 70 DGDDAEEDEEEEVEAEEDEEAEEEEEEEEEEEEEEEDSKERSPSSISGDQS 120
>At5g19630.1 68418.m02336 expressed protein
Length = 228
Score = 27.1 bits (57), Expect = 5.9
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2
Query: 371 VIILVFPFPFVGGCQ 327
VI+LV PF +GGCQ
Sbjct: 41 VIVLVHPFSLLGGCQ 55
>At5g11140.1 68418.m01302 hypothetical protein
Length = 241
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -1
Query: 225 NTKIGQLSTVTYHSQDVSRVVVF*TTTKLK 136
N+K+ LST TYH + ++ VV+ +T L+
Sbjct: 85 NSKLQSLSTRTYHLETLAEVVIELQSTPLR 114
>At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEMETER
protein [Arabidopsis thaliana] GI:21743571; contains
Pfam profile PF00730: HhH-GPD superfamily base excision
DNA repair protein
Length = 1729
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 348 EGEDEDDNVKESWEDEEVAKNRRRKD 425
EG++E D KE W +EE R R D
Sbjct: 719 EGDEEKDKKKEKWWEEERRVFRGRAD 744
>At3g50590.1 68416.m05533 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); some
similarity to s-tomosyn isoform (GI:4689231)[Rattus
norvegicus]; contains non-consensus AT-AC splice sites at
intron 18
Length = 1606
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 249 FGADSGVLKMDVSWDADNFEPKLPTTLAASNKWE 350
F A+S V K W N+E K PT + + KWE
Sbjct: 992 FAAESMVPK-GPEWGGGNWEIKTPTDMKSIPKWE 1024
>At3g45555.1 68416.m04920 zinc finger (C3HC4-type RING finger)
family protein low similarity to UbcM4-interacting
protein 4 [Mus musculus] GI:13991706; contains Pfam
profiles PF00097: Zinc finger C3HC4 type (RING finger),
PF01485: IBR (In Between Ring fingers) domain
Length = 213
Score = 27.1 bits (57), Expect = 5.9
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = +3
Query: 144 LLLSRKRRLWRHLVSDKSLSIVVRFWCSGEKFS 242
+L S+ + +W + ++S+ + RF+C + S
Sbjct: 78 ILTSKLKAMWEQKIEEESIPVTERFYCPNPRCS 110
>At3g44310.1 68416.m04758 nitrilase 1 (NIT1) identical to SP|P32961
Nitrilase 1 (EC 3.5.5.1) {Arabidopsis thaliana}
Length = 346
Score = 27.1 bits (57), Expect = 5.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 365 ILVFPFPFVGGCQRGREFGLEV 300
+++FP F+GG RG FGL V
Sbjct: 60 LVLFPEGFIGGYPRGFRFGLAV 81
>At5g56950.1 68418.m07109 nucleosome assembly protein (NAP),
putative similar to nucleosome assembly protein 1
[Glycine max] GI:1161252; contains Pfam profile PF00956:
Nucleosome assembly protein (NAP)
Length = 374
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 348 EGEDEDDNVKESWEDEEVAKNRRR 419
E EDED+ + E+EEV+K +++
Sbjct: 323 EDEDEDEEEDDEDEEEEVSKTKKK 346
>At5g35794.1 68418.m04297 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 662
Score = 26.6 bits (56), Expect = 7.7
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 315 LPTTLAASNKWEGEDEDDNVK-ESWEDEEVAKNRRRKD*GSDTSTT 449
+PT N E ED+N K E+ E+EE K+ R SD+ T
Sbjct: 89 IPTEEIQENMQTDEVEDENEKEEASEEEESGKSSRTLGSDSDSEET 134
>At4g17940.1 68417.m02672 expressed protein
Length = 274
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 345 WEGEDEDDNVKESWEDEEVA 404
WE ED+DD+ +E E+E +A
Sbjct: 246 WEAEDDDDDDEEEEEEEWMA 265
>At3g45510.1 68416.m04914 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 257
Score = 26.6 bits (56), Expect = 7.7
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 144 LLLSRKRRLWRHLVSDKSLSIVVRFWCSGEK 236
LL ++R +W + ++S+ + RF C K
Sbjct: 127 LLTPKQREMWEQRIKEESIPVCNRFHCPNPK 157
>At3g19810.1 68416.m02509 expressed protein contains Pfam PF02620:
Uncharacterized ACR, COG1399
Length = 321
Score = 26.6 bits (56), Expect = 7.7
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 336 SNKWEGEDEDDNVKESWEDEE 398
++K EGED+DDN +SW D E
Sbjct: 221 NDKEEGEDDDDN-DDSWIDWE 240
>At3g17170.1 68416.m02190 ribosomal protein S6 family protein (RFC3)
annotation temporarily based on supporting cDNA
gi|15620809|dbj|AB057424.1|; contains TIGRfam TIGR00166
and Pfam PF01250 profiles ribosomal protein S6.
Length = 314
Score = 26.6 bits (56), Expect = 7.7
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Frame = +3
Query: 291 DADNFEPKLP-----TTLAASNKWEGEDEDDNVKESWEDEEVAKNRRRK 422
DADN E ++ + ++ EGE+E+D E E ++ + N RR+
Sbjct: 257 DADNIEYEVDDDGNVVMVLYGDEEEGEEEEDGASEQEEGQDKSTNGRRE 305
>At3g16180.1 68416.m02043 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 591
Score = 26.6 bits (56), Expect = 7.7
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 2 WILTFLNQFVNIRLLGLRQYYVICSLFFNPTV 97
W+L L+ FVN+ YYV+CS + PTV
Sbjct: 545 WVLAILS-FVNVI------YYVVCSWSYGPTV 569
>At2g40540.1 68415.m05002 potassium transporter, putative (KT2)
identical to putative potassium transporter AtKT2p
[Arabidopsis thaliana] gi|2384671|gb|AAC49845, strong
similarity to potassium transporter HAK2p
[Mesembryanthemum crystallinum] GI:14091471; KUP/HAK/KT
Transporter family member, PMID:11500563
Length = 794
Score = 26.6 bits (56), Expect = 7.7
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 279 DVSWDADNFEPKLPTTLAASNKWE----GEDEDDNVKESWEDEEVAKNR 413
DV D D+FE +L + LA +++ + EDDN + +E +++R
Sbjct: 602 DVHQDVDSFETELVSKLADFIRYDWHKRTQQEDDNARSVQSNESSSESR 650
>At1g56510.1 68414.m06498 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1007
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 288 WDADNFEPKLPTTLAASNKWEGEDEDDNVKESWEDEEVAKNRRRKD 425
WDA + + +LP++ A N E +D +++ WE + N ++ D
Sbjct: 586 WDAYSGK-RLPSSFFAENLVEVNMQDSELQKLWEGTQCLANLKKID 630
>At1g03010.1 68414.m00273 phototropic-responsive NPH3 family protein
contains NPH3 family domain, Pfam:PF03000
Length = 634
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 261 SGVLKMDVSWDADNFEPKLP 320
SG+LK+D S+ N EP+ P
Sbjct: 184 SGLLKLDYSFSGTNIEPQTP 203
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,052,949
Number of Sequences: 28952
Number of extensions: 208518
Number of successful extensions: 873
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 732537840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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