Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10695
         (717 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0615 - 22761375-22761760,22762218-22765026                       31   0.69 
10_06_0136 - 11114409-11114576,11114656-11114784,11114873-111150...    31   1.2  
12_02_1261 + 27410921-27413401                                         29   2.8  
01_01_0091 - 719842-720902,721042-721071,721521-722226                 29   4.9  

>06_03_0615 - 22761375-22761760,22762218-22765026
          Length = 1064

 Score = 31.5 bits (68), Expect = 0.69
 Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
 Frame = +1

Query: 34  ISTSLH**RYFGESPN--NELLYLQVDTFSTCPLYMMV-LLSSTTHIQSKNLK*INKFSG 204
           IS  L   R+ GE P+  + L  LQ    S+  LY  + +LS  T + S N+   N FSG
Sbjct: 604 ISLDLSSNRFTGELPDEMSSLTQLQSLDLSSNGLYGSISVLSGLTSLTSLNIS-YNNFSG 662

Query: 205 AIRIRHFISNILLFCYYN 258
           AI +  F   +    Y N
Sbjct: 663 AIPVTPFFKTLSSSSYIN 680


>10_06_0136 -
           11114409-11114576,11114656-11114784,11114873-11115016,
           11115130-11115299,11116441-11116528,11116590-11116652,
           11116678-11116799,11118506-11118671
          Length = 349

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 41  LPYTNSAISVSLRTMSCSIYRWTLFQLVPYT*WYSFLL 154
           LP+ +  + ++LR +  ++Y WTL  L P T   SF L
Sbjct: 60  LPHPSKVLIIALRVLFYAVYLWTLVYLDPITEANSFKL 97


>12_02_1261 + 27410921-27413401
          Length = 826

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -3

Query: 493 DFFFYVSH*CNVENNCNKIICCFLKQK*TARTNVKLTKCILKRSRK-GR*ENTSYRSRGE 317
           D+  +++H C+ EN               +R  +K  KC LKR+RK G+ E  S  ++ E
Sbjct: 332 DYKSFIAHECSTENAFTNAAVETSDSFVNSRAALKPGKCALKRTRKQGQNEGGSSSTKTE 391

Query: 316 K 314
           K
Sbjct: 392 K 392


>01_01_0091 - 719842-720902,721042-721071,721521-722226
          Length = 598

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = -1

Query: 327 HEVKKPCFFLFLLITLPNCITTTVVVAK**YIRYKVTNSDGTAKLIYLF 181
           H  K P   + + +++P  +  T+VVA   Y+  K  N D     + +F
Sbjct: 235 HGSKSPAKVIIVAVSVPTIVVLTLVVASALYLSLKTKNDDEIQLKVEMF 283


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,482,679
Number of Sequences: 37544
Number of extensions: 266929
Number of successful extensions: 437
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)