Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10695
         (717 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_6505| Best HMM Match : FA_desaturase (HMM E-Value=1.4e-40)          29   2.8  
SB_39521| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.6  
SB_42429| Best HMM Match : FAD_binding_8 (HMM E-Value=8.8e-06)         28   8.7  

>SB_6505| Best HMM Match : FA_desaturase (HMM E-Value=1.4e-40)
          Length = 361

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = +1

Query: 472 EKHKKKNLILVLISTSVFFFYLLYVYTIQILFSTILFCV 588
           +  K  N + ++ +T   +FY+     + +LF++I++CV
Sbjct: 55  DNQKLSNALSIICNTEYNWFYIRLASMLALLFASIIYCV 93


>SB_39521| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 94

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 12/50 (24%), Positives = 24/50 (48%)
 Frame = +1

Query: 448 NYFQRYINEKHKKKNLILVLISTSVFFFYLLYVYTIQILFSTILFCVKCV 597
           N     ++  H    +I+++I TS+  FYL    T+ ++   I+  +  V
Sbjct: 23  NKLSSSLSHYHHHHYIIIIIILTSIIHFYLTVTVTVIVIVIVIVIVIVIV 72


>SB_42429| Best HMM Match : FAD_binding_8 (HMM E-Value=8.8e-06)
          Length = 359

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +2

Query: 197 LAVPSEFVTLYRIYYYFATTTVVVMQLGNVINKNKKKQGF 316
           L++P + V +  +Y       VVV    NVI    KK GF
Sbjct: 177 LSIPRDLVVMVTVYILQTWRWVVVKHPSNVIEIKMKKAGF 216


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,192,098
Number of Sequences: 59808
Number of extensions: 347923
Number of successful extensions: 884
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)