Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10695
         (717 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U27381-1|AAA96010.1| 1447|Homo sapiens protein ( Human Menkes di...    31   4.1  
Z94801-1|CAB08162.2| 1376|Homo sapiens Menkes Disease (ATP7A) pr...    31   5.4  
X82336-1|CAB94714.1| 1500|Homo sapiens Menkes disease protein.         31   5.4  
L06133-1|AAA35580.1| 1500|Homo sapiens Cu++-transporting P-type ...    31   5.4  
BC060798-1|AAH60798.1|  514|Homo sapiens transmembrane protein 1...    31   5.4  
BC053582-1|AAH53582.1|  525|Homo sapiens solute carrier family 3...    31   5.4  
BC030284-1|AAH30284.1|  410|Homo sapiens TMEM117 protein protein.      31   5.4  
AY044836-1|AAK98782.1|  525|Homo sapiens vesicular inhibitory am...    31   5.4  
AL645821-1|CAI42806.1| 1500|Homo sapiens ATPase, Cu++ transporti...    31   5.4  
AL133519-1|CAC15529.2|  525|Homo sapiens solute carrier family 3...    31   5.4  
AK057287-1|BAB71411.1|  514|Homo sapiens protein ( Homo sapiens ...    31   5.4  
AK055051-1|BAB70846.1|  525|Homo sapiens protein ( Homo sapiens ...    31   5.4  

>U27381-1|AAA96010.1| 1447|Homo sapiens protein ( Human Menkes
           disease gene (ATP7A), partial exon 23, partial cds. ).
          Length = 1447

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +1

Query: 442 YYNYFQRYINEKHKKKNL-ILVLISTSVFFFYLLYVYTI 555
           +Y Y Q Y   KHK  N+ +L++++T++ F Y L +  +
Sbjct: 729 WYFYIQAYKALKHKTANMDVLIVLATTIAFXYSLIILLV 767


>Z94801-1|CAB08162.2| 1376|Homo sapiens Menkes Disease (ATP7A)
           protein.
          Length = 1376

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +1

Query: 442 YYNYFQRYINEKHKKKNL-ILVLISTSVFFFYLLYVYTI 555
           +Y Y Q Y   KHK  N+ +L++++T++ F Y L +  +
Sbjct: 729 WYFYIQAYKALKHKTANMDVLIVLATTIAFAYSLIILLV 767


>X82336-1|CAB94714.1| 1500|Homo sapiens Menkes disease protein.
          Length = 1500

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +1

Query: 442 YYNYFQRYINEKHKKKNL-ILVLISTSVFFFYLLYVYTI 555
           +Y Y Q Y   KHK  N+ +L++++T++ F Y L +  +
Sbjct: 729 WYFYIQAYKALKHKTANMDVLIVLATTIAFAYSLIILLV 767


>L06133-1|AAA35580.1| 1500|Homo sapiens Cu++-transporting P-type
           ATPase protein.
          Length = 1500

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +1

Query: 442 YYNYFQRYINEKHKKKNL-ILVLISTSVFFFYLLYVYTI 555
           +Y Y Q Y   KHK  N+ +L++++T++ F Y L +  +
Sbjct: 729 WYFYIQAYKALKHKTANMDVLIVLATTIAFAYSLIILLV 767


>BC060798-1|AAH60798.1|  514|Homo sapiens transmembrane protein 117
           protein.
          Length = 514

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +2

Query: 218 VTLYRIYYYFATTTVVVMQLGNVINKNKKKQGFFTS*SIGRVFLSSFSRTF 370
           +TL+    +  T+ VV++   + I+ +K  +GF  S  + R FL+SF   F
Sbjct: 199 ITLFWTVLFTLTSVVVLVITTDWISWDKLNRGFLPSDEVSRAFLASFILVF 249


>BC053582-1|AAH53582.1|  525|Homo sapiens solute carrier family 32
           (GABA vesicular transporter), member 1 protein.
          Length = 525

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 172 KNLK*INKFSGAIRIRHFISNILLFCY 252
           KNLK ++KFS    + HF+ NIL+  Y
Sbjct: 258 KNLKAVSKFSLLCTLAHFVINILVIAY 284


>BC030284-1|AAH30284.1|  410|Homo sapiens TMEM117 protein protein.
          Length = 410

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +2

Query: 218 VTLYRIYYYFATTTVVVMQLGNVINKNKKKQGFFTS*SIGRVFLSSFSRTF 370
           +TL+    +  T+ VV++   + I+ +K  +GF  S  + R FL+SF   F
Sbjct: 95  ITLFWTVLFTLTSVVVLVITTDWISWDKLNRGFLPSDEVSRAFLASFILVF 145


>AY044836-1|AAK98782.1|  525|Homo sapiens vesicular inhibitory amino
           acid transporter protein.
          Length = 525

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 172 KNLK*INKFSGAIRIRHFISNILLFCY 252
           KNLK ++KFS    + HF+ NIL+  Y
Sbjct: 258 KNLKAVSKFSLLCTLAHFVINILVIAY 284


>AL645821-1|CAI42806.1| 1500|Homo sapiens ATPase, Cu++ transporting,
           alpha polypeptide (Menkes syndrome) protein.
          Length = 1500

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +1

Query: 442 YYNYFQRYINEKHKKKNL-ILVLISTSVFFFYLLYVYTI 555
           +Y Y Q Y   KHK  N+ +L++++T++ F Y L +  +
Sbjct: 729 WYFYIQAYKALKHKTANMDVLIVLATTIAFAYSLIILLV 767


>AL133519-1|CAC15529.2|  525|Homo sapiens solute carrier family 32
           (GABA vesicular transporter), member 1 protein.
          Length = 525

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 172 KNLK*INKFSGAIRIRHFISNILLFCY 252
           KNLK ++KFS    + HF+ NIL+  Y
Sbjct: 258 KNLKAVSKFSLLCTLAHFVINILVIAY 284


>AK057287-1|BAB71411.1|  514|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32725 fis, clone TESTI2000970. ).
          Length = 514

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +2

Query: 218 VTLYRIYYYFATTTVVVMQLGNVINKNKKKQGFFTS*SIGRVFLSSFSRTF 370
           +TL+    +  T+ VV++   + I+ +K  +GF  S  + R FL+SF   F
Sbjct: 199 ITLFWTVLFTLTSVVVLVITTDWISWDKLNRGFLPSDEVSRAFLASFILVF 249


>AK055051-1|BAB70846.1|  525|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30489 fis, clone BRAWH2000142, highly similar to
           Rattus norvegicus vesicular GABA transporter (VGAT)
           mRNA. ).
          Length = 525

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 172 KNLK*INKFSGAIRIRHFISNILLFCY 252
           KNLK ++KFS    + HF+ NIL+  Y
Sbjct: 258 KNLKAVSKFSLLCTLAHFVINILVIAY 284


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,051,833
Number of Sequences: 237096
Number of extensions: 1672371
Number of successful extensions: 2402
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2401
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)