Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10695
         (717 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058425-1|AAL13654.1|  681|Drosophila melanogaster GH20226p pro...    29   8.4  
AE014297-2584|AAF55596.1|  681|Drosophila melanogaster CG7720-PB...    29   8.4  
AE014297-2583|AAF55597.1|  681|Drosophila melanogaster CG7720-PA...    29   8.4  

>AY058425-1|AAL13654.1|  681|Drosophila melanogaster GH20226p
           protein.
          Length = 681

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 448 NYFQRYINEKHKKKNLILVLISTS-VFFFYLLYVYTIQILFSTILFC 585
           N+ QRY++ K  K+   ++L +   VFFF+ +   +  +++ST + C
Sbjct: 261 NFMQRYVSLKSLKQVRRVMLTNVPLVFFFFSISWISGMVIYSTYINC 307


>AE014297-2584|AAF55596.1|  681|Drosophila melanogaster CG7720-PB,
           isoform B protein.
          Length = 681

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 448 NYFQRYINEKHKKKNLILVLISTS-VFFFYLLYVYTIQILFSTILFC 585
           N+ QRY++ K  K+   ++L +   VFFF+ +   +  +++ST + C
Sbjct: 261 NFMQRYVSLKSLKQVRRVMLTNVPLVFFFFSISWISGMVIYSTYINC 307


>AE014297-2583|AAF55597.1|  681|Drosophila melanogaster CG7720-PA,
           isoform A protein.
          Length = 681

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 448 NYFQRYINEKHKKKNLILVLISTS-VFFFYLLYVYTIQILFSTILFC 585
           N+ QRY++ K  K+   ++L +   VFFF+ +   +  +++ST + C
Sbjct: 261 NFMQRYVSLKSLKQVRRVMLTNVPLVFFFFSISWISGMVIYSTYINC 307


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,362,882
Number of Sequences: 53049
Number of extensions: 495580
Number of successful extensions: 1047
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)