Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10695
         (717 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g45290.1 68416.m04890 seven transmembrane MLO family protein ...    29   2.3  
At5g53860.2 68418.m06698 expressed protein                             29   3.1  
At5g53860.1 68418.m06697 expressed protein                             29   3.1  
At1g66290.1 68414.m07528 F-box family protein contains F-box dom...    29   4.1  
At5g55350.1 68418.m06897 membrane bound O-acyl transferase (MBOA...    27   9.4  
At2g36820.1 68415.m04515 expressed protein                             27   9.4  

>At3g45290.1 68416.m04890 seven transmembrane MLO family protein /
           MLO-like protein 3 (MLO3) membrane protein Mlo3
           [Arabidopsis thaliana] gi|14091576|gb|AAK53796; similar
           to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221
           [Hordeum vulgare][Barley]
          Length = 508

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 22/76 (28%), Positives = 33/76 (43%)
 Frame = +1

Query: 340 CFLIFLFENVSKYTW*VLH*YVQSIFVLKNNKLFYYNYFQRYINEKHKKKNLILVLISTS 519
           CF    + +V+K  +  L        V  NN   + NY QR ++E  K    I  L+  +
Sbjct: 228 CFFRQFYNSVAKVDYLTLRHGFIFAHVSSNNAFNFQNYIQRSLHEDFKTVVGISPLMWLT 287

Query: 520 VFFFYLLYVYTIQILF 567
           V  F LL V   ++ F
Sbjct: 288 VVIFMLLDVSGWRVYF 303


>At5g53860.2 68418.m06698 expressed protein
          Length = 422

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -1

Query: 369 NVLEKEDKKTRPIDHEVKKPCFFLFLLITLPNCI 268
           NVL+K D     I H +K P    F LITLP  +
Sbjct: 204 NVLKKMDYPYEHIVHSMKDPSIANFWLITLPQIV 237


>At5g53860.1 68418.m06697 expressed protein
          Length = 402

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -1

Query: 369 NVLEKEDKKTRPIDHEVKKPCFFLFLLITLPNCI 268
           NVL+K D     I H +K P    F LITLP  +
Sbjct: 184 NVLKKMDYPYEHIVHSMKDPSIANFWLITLPQIV 217


>At1g66290.1 68414.m07528 F-box family protein contains F-box domain
           Pfam:PF00646
          Length = 453

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 348 KKTRPIDHEV-KKPCFFLFLLITLPNCITTTVVV 250
           K T  +DH   KK C  L  LIT+P C T+  V+
Sbjct: 418 KLTLSLDHSSRKKSCVILRELITIPRCSTSCRVI 451


>At5g55350.1 68418.m06897 membrane bound O-acyl transferase (MBOAT)
           family protein / wax synthase-related contains
           similarity to wax synthase  wax synthase - Simmondsia
           chinensis, PID:g5020219 similar to wax synthase
           [gi:5020219] from Simmondsia chinensis
          Length = 345

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = +1

Query: 439 FYYNYFQRYINEKHKKKNLILVLISTSVFFFYLLYVYTIQILFSTILFC 585
           F+      Y  ++H    ++LVL S  ++  Y + +  +++L S  L+C
Sbjct: 125 FFGVLLHMYEYKQHMSPTVLLVLYSLHIYLEYEILLAPLKVLLSISLWC 173


>At2g36820.1 68415.m04515 expressed protein 
          Length = 183

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +1

Query: 493 LILVLISTSVFFFYLLYVYTIQILFSTI 576
           L + ++S  V+FFY+L    +Q+L S++
Sbjct: 68  LAMSVLSDQVYFFYILLAEAVQLLVSSL 95


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,492,474
Number of Sequences: 28952
Number of extensions: 247786
Number of successful extensions: 513
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)