Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10694
         (760 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051790-1|AAK93214.1|  320|Drosophila melanogaster LD30634p pro...    50   5e-06
AE014297-894|AAF54350.1|  320|Drosophila melanogaster CG8444-PA ...    50   5e-06
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   9.1  

>AY051790-1|AAK93214.1|  320|Drosophila melanogaster LD30634p
           protein.
          Length = 320

 Score = 49.6 bits (113), Expect = 5e-06
 Identities = 21/26 (80%), Positives = 24/26 (92%)
 Frame = +3

Query: 255 YALMDMDPGRDSIIYRMTNTRMKKDN 332
           YA+  MDPGRDSIIYRMT+TR+KKDN
Sbjct: 295 YAIAAMDPGRDSIIYRMTSTRIKKDN 320



 Score = 39.9 bits (89), Expect = 0.004
 Identities = 17/26 (65%), Positives = 20/26 (76%)
 Frame = +1

Query: 175 YSADYAAIFNIILWFGVVFTFTLIAI 252
           Y +DY  IFNIILWF VVF  +L+AI
Sbjct: 268 YGSDYPVIFNIILWFMVVFGLSLLAI 293


>AE014297-894|AAF54350.1|  320|Drosophila melanogaster CG8444-PA
           protein.
          Length = 320

 Score = 49.6 bits (113), Expect = 5e-06
 Identities = 21/26 (80%), Positives = 24/26 (92%)
 Frame = +3

Query: 255 YALMDMDPGRDSIIYRMTNTRMKKDN 332
           YA+  MDPGRDSIIYRMT+TR+KKDN
Sbjct: 295 YAIAAMDPGRDSIIYRMTSTRIKKDN 320



 Score = 39.9 bits (89), Expect = 0.004
 Identities = 17/26 (65%), Positives = 20/26 (76%)
 Frame = +1

Query: 175 YSADYAAIFNIILWFGVVFTFTLIAI 252
           Y +DY  IFNIILWF VVF  +L+AI
Sbjct: 268 YGSDYPVIFNIILWFMVVFGLSLLAI 293


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 536 MKLGRAEVITRSGSVALATVYDKLGRLTFGYCYLHG 643
           M+L  A+ +  S   +  T Y KLG+L  GY   HG
Sbjct: 784 MQLPFADYVVASDDCSFETNYAKLGQLPEGYALWHG 819


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,478,101
Number of Sequences: 53049
Number of extensions: 614409
Number of successful extensions: 1352
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1352
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)