Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10693
         (768 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    24   1.5  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    23   2.7  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    23   3.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   4.7  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   4.7  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.7  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.7  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -3

Query: 256 WMLLFTY*KIVLQALAATRNDLVLGNSMRSFDVESDFLRLSL 131
           W L+F + +IVLQ L++     +L  S + F  E  F  + L
Sbjct: 176 WSLIFLFGRIVLQLLSSL--GFLLYASKKQFTFEETFAIIHL 215


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 569 CNEDCTPNAKDAPHYSVDATPD 634
           CNE    N +   H+ +D  PD
Sbjct: 73  CNEKVKANVRKVLHHLIDNKPD 94


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 80  CNRYQKVSYSILIGKRTRNKMR 15
           CNR    SY++LI +RT    R
Sbjct: 85  CNRQFTKSYNLLIHERTHTDER 106


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 714 QQYYDLYLRRCPHVTVISGSHNLDV 640
           + + D+  ++C + T+    HNLDV
Sbjct: 299 EHFEDVVHKKCSNFTLPEIQHNLDV 323


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 338 YSIGSHKTLLNDILHK*QVKY*PLFNAGFE 427
           Y +GS   L+ D  H     Y    NAGFE
Sbjct: 59  YHVGSKFLLIGDAAHAMVPFYGQGMNAGFE 88


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 338 YSIGSHKTLLNDILHK*QVKY*PLFNAGFE 427
           Y +GS   L+ D  H     Y    NAGFE
Sbjct: 292 YHVGSKFLLIGDAAHAMVPFYGQGMNAGFE 321


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 338 YSIGSHKTLLNDILHK*QVKY*PLFNAGFE 427
           Y +GS   L+ D  H     Y    NAGFE
Sbjct: 292 YHVGSKFLLIGDAAHAMVPFYGQGMNAGFE 321


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,604
Number of Sequences: 336
Number of extensions: 3587
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)