Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10693
         (768 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016443-3|AAC24281.1|  395|Caenorhabditis elegans Hypothetical ...    31   0.68 
Z70279-5|CAA94243.3|  137|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AL023841-3|CAC42357.1|  137|Caenorhabditis elegans Hypothetical ...    29   2.8  
AF016443-2|AAC24272.1|  359|Caenorhabditis elegans Hypothetical ...    29   2.8  
AF016443-1|AAC24277.1|  366|Caenorhabditis elegans Hypothetical ...    29   3.6  
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ...    28   8.4  
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ...    28   8.4  

>AF016443-3|AAC24281.1|  395|Caenorhabditis elegans Hypothetical
           protein C17E7.7 protein.
          Length = 395

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = -1

Query: 438 KEYGSKPALNKG*YLTCYLCKMSFRRVL*LPMEY--KVNNSFF 316
           K++GS+P       LTC  CKM FRRV+   +EY  K +N+ F
Sbjct: 60  KDFGSQPKQ----VLTCDACKMFFRRVVTEKLEYTCKCSNNCF 98


>Z70279-5|CAA94243.3|  137|Caenorhabditis elegans Hypothetical
           protein K11E8.1b protein.
          Length = 137

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 616 SRRDAGLCNVQIVTSANYCHMR 681
           S  DA  C +QI+   NYCH R
Sbjct: 107 SEADASCCIMQILDGVNYCHQR 128


>AL023841-3|CAC42357.1|  137|Caenorhabditis elegans Hypothetical
           protein K11E8.1b protein.
          Length = 137

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 616 SRRDAGLCNVQIVTSANYCHMR 681
           S  DA  C +QI+   NYCH R
Sbjct: 107 SEADASCCIMQILDGVNYCHQR 128


>AF016443-2|AAC24272.1|  359|Caenorhabditis elegans Hypothetical
           protein C17E7.6 protein.
          Length = 359

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -1

Query: 396 LTCYLCKMSFRRVL*LPMEYK 334
           LTC  CKM FRR++ L  +YK
Sbjct: 41  LTCDACKMFFRRIVILKKDYK 61


>AF016443-1|AAC24277.1|  366|Caenorhabditis elegans Hypothetical
           protein C17E7.5 protein.
          Length = 366

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -1

Query: 396 LTCYLCKMSFRRVL*LPMEYK 334
           LTC  CKM +RR++ L  EYK
Sbjct: 54  LTCDACKMFYRRIVILNREYK 74


>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
           protein Y46G5A.6 protein.
          Length = 1002

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -2

Query: 569 TDFIVCT*FIYESSIIKGGNRAFGQKKMLLI 477
           T  IVCT   Y+    KGG RA+ Q   LLI
Sbjct: 377 TQVIVCTPEKYDVVTRKGGERAYNQMVRLLI 407


>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
           protein Y46G5A.4 protein.
          Length = 2145

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -2

Query: 569 TDFIVCT*FIYESSIIKGGNRAFGQKKMLLI 477
           T  IVCT   Y+    KGG RA+ Q   LLI
Sbjct: 577 TQVIVCTPEKYDVVTRKGGERAYNQMVRLLI 607


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,713,343
Number of Sequences: 27780
Number of extensions: 325695
Number of successful extensions: 678
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)