Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10692
         (552 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P21969 Cluster: Protein FPV058; n=14; Poxviridae|Rep: P...    34   2.5  
UniRef50_A6LZM3 Cluster: Putative uncharacterized protein; n=1; ...    32   7.7  

>UniRef50_P21969 Cluster: Protein FPV058; n=14; Poxviridae|Rep:
           Protein FPV058 - Fowlpox virus (FPV)
          Length = 791

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = -2

Query: 392 SKIRSNYFRREFNRYVF-WFEILKREIPSLAPTPAIDLNLKDYSFPVTKITYNLKFKANA 216
           SKI+SNYFR  F + +  WF   K  +P+L   P  D  + D+ F + K+   +    + 
Sbjct: 656 SKIQSNYFRYAFLKILLGWFS--KYHVPNLRILPTPD-KIPDFKFRL-KVESLIIPSNST 711

Query: 215 HVTNVDRL 192
           HV  VD+L
Sbjct: 712 HVKYVDKL 719


>UniRef50_A6LZM3 Cluster: Putative uncharacterized protein; n=1;
           Clostridium beijerinckii NCIMB 8052|Rep: Putative
           uncharacterized protein - Clostridium beijerinckii NCIMB
           8052
          Length = 410

 Score = 32.3 bits (70), Expect = 7.7
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -3

Query: 115 YVSKLIFVLILFSQMKFVFFLMKISDTRKFKS 20
           Y+ K I +L+LF  + ++FFLM +     FKS
Sbjct: 11  YIRKKIMLLLLFQAIVYIFFLMNLFSMSMFKS 42


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 446,344,026
Number of Sequences: 1657284
Number of extensions: 7675349
Number of successful extensions: 17746
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17745
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)