Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10692
         (552 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.8  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   4.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 228  EFQIICNFCNW 260
            EF+++C F NW
Sbjct: 1822 EFKVVCYFTNW 1832



 Score = 21.4 bits (43), Expect = 5.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 231  FQIICNFCNW 260
            F+I+C F NW
Sbjct: 1398 FKIVCYFTNW 1407



 Score = 20.6 bits (41), Expect = 9.5
 Identities = 4/11 (36%), Positives = 9/11 (81%)
 Frame = +3

Query: 228  EFQIICNFCNW 260
            +++++C F NW
Sbjct: 2320 DYKVVCYFTNW 2330


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 58  KKQISFVKTKLTQK 99
           K+ ISF K KLT K
Sbjct: 124 KESISFAKVKLTNK 137


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 128 VLTLLRVQTYFCVNFVFTNEICF 60
           +L LL +  +FC   +FT  + F
Sbjct: 160 LLFLLCIYHFFCAFIIFTMHLLF 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,846
Number of Sequences: 336
Number of extensions: 2272
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)