Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10691
         (806 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50797-7|CAD27609.1|  195|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AB086410-1|BAC44993.1|  195|Caenorhabditis elegans ABF-6 protein.      28   6.8  

>Z50797-7|CAD27609.1|  195|Caenorhabditis elegans Hypothetical
           protein T22H6.7 protein.
          Length = 195

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -3

Query: 777 YDINY*FNGTFRIGYIAANLSFRSLYNNHYSY*KLYQNNFNELG 646
           Y+ N  + G    GY  +N +F S  N  YSY + Y N  N+ G
Sbjct: 128 YNTNNGYRGQPTPGYGNSNSNFNS--NQQYSYQQYYNNRNNQYG 169


>AB086410-1|BAC44993.1|  195|Caenorhabditis elegans ABF-6 protein.
          Length = 195

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -3

Query: 777 YDINY*FNGTFRIGYIAANLSFRSLYNNHYSY*KLYQNNFNELG 646
           Y+ N  + G    GY  +N +F S  N  YSY + Y N  N+ G
Sbjct: 128 YNTNNGYRGQPTPGYGNSNSNFNS--NQQYSYQQYYNNRNNQYG 169


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,846,196
Number of Sequences: 27780
Number of extensions: 337680
Number of successful extensions: 618
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)