Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10689
         (566 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.34 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.7  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +2

Query: 149 PQLGPKMADKNERTFTEEQLRAHNAELNLQMGFNKAPPSPVMVASVTP 292
           PQ     A  N         ++H   +    GFN+A  SP++ +S +P
Sbjct: 140 PQTAAMAAYLNAAAVAAAAQQSHRLMMTSPSGFNRASVSPLISSSSSP 187


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -3

Query: 87  WGMLRLSKRSAVWNISSSGTPYFLI 13
           W +  +   + +W+ +S+  P FLI
Sbjct: 246 WTIYEMYHLAILWSCTSTNCPRFLI 270


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 99  VCTLWEELLKNIPSLQDL 152
           + T+  E  +N+P L+DL
Sbjct: 152 IATIAYETFQNLPELEDL 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,335
Number of Sequences: 336
Number of extensions: 2945
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)