Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10689
         (566 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79755-6|CAB02104.1|  192|Caenorhabditis elegans Hypothetical pr...    60   1e-09
AF169201-2|AAF01679.1|  192|Caenorhabditis elegans CPN-1 protein.      60   1e-09
AF040641-1|AAB94947.2|  203|Caenorhabditis elegans Calponin prot...    50   1e-06
U97013-5|AAB52338.1|  142|Caenorhabditis elegans Calponin protei...    42   4e-04
AF039711-7|AAB96713.3|  154|Caenorhabditis elegans Calponin prot...    40   0.002
Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr...    31   0.58 
Z70306-3|CAA94325.1|  318|Caenorhabditis elegans Hypothetical pr...    29   1.8  
Z79601-5|CAB01882.1|  450|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z79757-8|CAB02128.2|  355|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z68303-7|CAA92642.2|  445|Caenorhabditis elegans Hypothetical pr...    27   7.1  
AF435979-1|AAM46663.1|  445|Caenorhabditis elegans equilibrative...    27   7.1  
Z78061-3|CAB60286.1|  662|Caenorhabditis elegans Hypothetical pr...    27   9.4  
AL117200-16|CAB60587.1|  662|Caenorhabditis elegans Hypothetical...    27   9.4  
AC024876-8|AAF60889.1|  187|Caenorhabditis elegans Hypothetical ...    27   9.4  

>Z79755-6|CAB02104.1|  192|Caenorhabditis elegans Hypothetical
           protein F43G9.9 protein.
          Length = 192

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 32/75 (42%), Positives = 48/75 (64%)
 Frame = +2

Query: 29  VPEEEIFQTADLFERRNIPQVTLCLYALGRITQKHPEFTGPQLGPKMADKNERTFTEEQL 208
           V + E+FQT DL+E ++   V +CL +L R ++K+  F    LGPK A  + R +T+EQL
Sbjct: 105 VQKSELFQTVDLYEGQDPNAVLICLASLARKSEKN--FGRSGLGPKEAQGDRREWTDEQL 162

Query: 209 RAHNAELNLQMGFNK 253
           +A +  + LQMG NK
Sbjct: 163 KAGHNVIGLQMGSNK 177


>AF169201-2|AAF01679.1|  192|Caenorhabditis elegans CPN-1 protein.
          Length = 192

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 32/75 (42%), Positives = 48/75 (64%)
 Frame = +2

Query: 29  VPEEEIFQTADLFERRNIPQVTLCLYALGRITQKHPEFTGPQLGPKMADKNERTFTEEQL 208
           V + E+FQT DL+E ++   V +CL +L R ++K+  F    LGPK A  + R +T+EQL
Sbjct: 105 VQKSELFQTVDLYEGQDPNAVLICLASLARKSEKN--FGRSGLGPKEAQGDRREWTDEQL 162

Query: 209 RAHNAELNLQMGFNK 253
           +A +  + LQMG NK
Sbjct: 163 KAGHNVIGLQMGSNK 177


>AF040641-1|AAB94947.2|  203|Caenorhabditis elegans Calponin protein
           2 protein.
          Length = 203

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2   FQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYALGRITQ-KHPEFTGPQLGPKMADK 178
           F AA K++GV E   FQT DL+E +   +V  CL  L  + Q +      P    K+A  
Sbjct: 97  FLAAAKQFGVMEISCFQTVDLYENKQCYKVIECLRLLAAVAQSRSSHLEHPAWVVKLAQS 156

Query: 179 NERTFTEEQLRAHNAELNLQMGFNK 253
           + R F E  +R     + LQ G NK
Sbjct: 157 SPRQFPEAVMRRGEMVIPLQYGTNK 181


>U97013-5|AAB52338.1|  142|Caenorhabditis elegans Calponin protein 3
           protein.
          Length = 142

 Score = 41.5 bits (93), Expect = 4e-04
 Identities = 19/38 (50%), Positives = 26/38 (68%)
 Frame = +2

Query: 17  KKYGVPEEEIFQTADLFERRNIPQVTLCLYALGRITQK 130
           KK GVP EE FQ+ +L E R++  V + L +LGR+ QK
Sbjct: 97  KKQGVPNEETFQSVELVEGRDLFSVCVTLLSLGRVLQK 134


>AF039711-7|AAB96713.3|  154|Caenorhabditis elegans Calponin protein
           4 protein.
          Length = 154

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 18/43 (41%), Positives = 27/43 (62%)
 Frame = +2

Query: 2   FQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYALGRITQK 130
           F  A +  GV +EE FQ+ DLF+ R++  VT+ L +L R  +K
Sbjct: 95  FSTAARSLGVKDEETFQSVDLFDGRDLFSVTVTLQSLARKVEK 137


>Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical
           protein F09C3.1 protein.
          Length = 1391

 Score = 31.1 bits (67), Expect = 0.58
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = +2

Query: 2   FQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYALGRITQK 130
           ++ A++   +PE  I +TAD+FE RN+  V  CL+AL  +  +
Sbjct: 123 WRRAMESVRLPEIFIPETADVFEGRNMKTV-FCLFALATLLHR 164


>Z70306-3|CAA94325.1|  318|Caenorhabditis elegans Hypothetical
           protein C06G8.4 protein.
          Length = 318

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 349 FVHGRIWLNDFFTFKIILPITL 414
           F+ GRIW+N  F F I +P  +
Sbjct: 253 FILGRIWINPIFEFSIFVPTVI 274


>Z79601-5|CAB01882.1|  450|Caenorhabditis elegans Hypothetical
           protein K09A9.3 protein.
          Length = 450

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 325 IFSTLISVFVHGRIWLNDFFTFKIILPITL 414
           + +T+I ++V    WL  FFT  II  I L
Sbjct: 133 VITTMIFIYVETSTWLTGFFTLTIITIIVL 162


>Z79757-8|CAB02128.2|  355|Caenorhabditis elegans Hypothetical
           protein F55B12.7 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 394 IILPITLCQRSCDRFYLIYFKY 459
           ++ PI     SC+RFY++YF +
Sbjct: 127 LLTPILQVSMSCNRFYVLYFPF 148


>Z68303-7|CAA92642.2|  445|Caenorhabditis elegans Hypothetical
           protein ZK809.4 protein.
          Length = 445

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 325 IFSTLISVFVHGRIWLNDFFTFKIILPITL 414
           + +T++ ++V    WL  FFT  II  I L
Sbjct: 128 VITTMMFIYVETSTWLTGFFTLTIITIIVL 157


>AF435979-1|AAM46663.1|  445|Caenorhabditis elegans equilibrative
           nucleoside transporter1 protein.
          Length = 445

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 325 IFSTLISVFVHGRIWLNDFFTFKIILPITL 414
           + +T++ ++V    WL  FFT  II  I L
Sbjct: 128 VITTMMFIYVETSTWLTGFFTLTIITIIVL 157


>Z78061-3|CAB60286.1|  662|Caenorhabditis elegans Hypothetical
           protein C48G7.3 protein.
          Length = 662

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 326 IGKNLEAVYMWRVLPKPP*PDWEAPY 249
           +G  +EA YMW +LP+P     +A Y
Sbjct: 471 VGCEVEAWYMWELLPQPIVTQSDASY 496


>AL117200-16|CAB60587.1|  662|Caenorhabditis elegans Hypothetical
           protein C48G7.3 protein.
          Length = 662

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 326 IGKNLEAVYMWRVLPKPP*PDWEAPY 249
           +G  +EA YMW +LP+P     +A Y
Sbjct: 471 VGCEVEAWYMWELLPQPIVTQSDASY 496


>AC024876-8|AAF60889.1|  187|Caenorhabditis elegans Hypothetical
           protein Y94H6A.8 protein.
          Length = 187

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +3

Query: 291 PPHVNC-F*IFPNIFHIDISIRAW 359
           PPH+   F IFP  F + +S++AW
Sbjct: 24  PPHIPLKFPIFPTKFTLQMSLKAW 47


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,958,449
Number of Sequences: 27780
Number of extensions: 280553
Number of successful extensions: 657
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)