Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10688
         (741 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.46 
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    27   0.61 
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       26   1.4  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   1.9  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      25   3.2  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   4.3  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    24   4.3  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   5.7  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   5.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 0.46
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +2

Query: 305 CWRAIGC*HTVETWIR*CRAWSHRNITERGNGVRPMTSL 421
           C   +G   T E W++ C++ S   +++R   V P+ SL
Sbjct: 329 CVSILGTLITPELWMKNCKSCSISPVSDRSESVSPVPSL 367


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 27.1 bits (57), Expect = 0.61
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -2

Query: 587 QRFVVGPLSYEVRCLVGRVHGRHVTGSRMISSVRLP 480
           Q+  +G + + +R +  R H RHV G+    +   P
Sbjct: 12  QKSSIGAIEFRLRTISNRTHQRHVYGTSKTKNASAP 47


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 445 FKNRLAGYHKTGGNLTELIIREP 513
           F +  +G+HK  G+   LI+REP
Sbjct: 182 FYHSHSGHHKVNGHYGALIVREP 204


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -3

Query: 157 NDAVFKEIVRMRLMR*IQKQRDQSHESVLSLNTSISGNVI*ERCQ 23
           +D +  E+V+ +L+   QK+ ++SH+S   L       +   RC+
Sbjct: 164 DDDLTMELVKSKLLDEAQKRMEKSHQSESILRVGPEKKITCHRCR 208


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -3

Query: 700 YLFRT*LSIHLLQDVVNVNFLTYSSTYF 617
           YL+RT L++ L+  +   N LT+ S++F
Sbjct: 36  YLYRTILALRLVTLLPCFNVLTFISSFF 63


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 244 YRESKMAPDFLSSSKALYEELLESYRVLTY 333
           Y E++MAP   ++S    EE ++ Y  L+Y
Sbjct: 255 YTEAQMAPGLTTASPVEPEEGVDFYEELSY 284


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +3

Query: 522  APMDTPDQTAYFITQWTHNEPLDQPIGTTIDL 617
            AP+D   Q  Y +    +++ +  P+ +T+DL
Sbjct: 1343 APLDREQQMMYDLRIEAYDQGIPTPLSSTVDL 1374


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +1

Query: 481 GNLTELIIREPVTWRPWTRPTKQRTS*LNGPTTNRWTNRSEL 606
           GN TE  I  PV        ++QR +    PTT+ WT++S L
Sbjct: 77  GNSTEAFICTPVL-------SRQRAT--RAPTTSTWTSKSVL 109


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = -1

Query: 462 CQSIFKHVRISYS--LNEVIGRTPFPRSVMFRCDHARHHLIQVSTVCQHPIA 313
           C    + V  S+S    ++   TP  R +   CD AR  + Q S + +  IA
Sbjct: 268 CDKTMQRVTTSHSDPHRDLFWWTPLLRLLRENCDRARDRMRQTSDLQERSIA 319


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 736,237
Number of Sequences: 2352
Number of extensions: 15466
Number of successful extensions: 37
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)