BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10688
(741 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY358549-1|AAQ88913.1| 476|Homo sapiens CPVL protein. 48 5e-05
AF106704-1|AAG37991.2| 476|Homo sapiens putative serine carboxy... 48 5e-05
AC005162-1|AAC23787.1| 295|Homo sapiens unknown protein. 48 5e-05
>AY358549-1|AAQ88913.1| 476|Homo sapiens CPVL protein.
Length = 476
Score = 47.6 bits (108), Expect = 5e-05
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Frame = +1
Query: 250 ESKMAPDFLSSSKALYEELLESYRVLTYCGNLDQMMPCVVTSEHYRTWKWSSSDDFIKAV 429
E + D + S K E++ +Y+VL Y G LD ++ +T W S ++ KA
Sbjct: 356 EKYLREDTVQSVKPWLTEIMNNYKVLIYNGQLDIIVAAALTERSLMGMDWKGSQEYKKAE 415
Query: 430 RNPY-MFKN--RLAGYHKTGGNLTELIIREPVTWRPWTRPTK 546
+ + +FK+ +AGY + G+ ++IIR P+ +P +
Sbjct: 416 KKVWKIFKSDSEVAGYIRQAGDFHQVIIRGGGHILPYDQPLR 457
>AF106704-1|AAG37991.2| 476|Homo sapiens putative serine
carboxypeptidase CPVL protein.
Length = 476
Score = 47.6 bits (108), Expect = 5e-05
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Frame = +1
Query: 250 ESKMAPDFLSSSKALYEELLESYRVLTYCGNLDQMMPCVVTSEHYRTWKWSSSDDFIKAV 429
E + D + S K E++ +Y+VL Y G LD ++ +T W S ++ KA
Sbjct: 356 EKYLREDTVQSVKPWLTEIMNNYKVLIYNGQLDIIVAAALTEHSLMGMDWKGSQEYKKAE 415
Query: 430 RNPY-MFKN--RLAGYHKTGGNLTELIIREPVTWRPWTRPTK 546
+ + +FK+ +AGY + G+ ++IIR P+ +P +
Sbjct: 416 KKVWKIFKSDSEVAGYIRQAGDFHQVIIRGGGHILPYDQPLR 457
>AC005162-1|AAC23787.1| 295|Homo sapiens unknown protein.
Length = 295
Score = 47.6 bits (108), Expect = 5e-05
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Frame = +1
Query: 250 ESKMAPDFLSSSKALYEELLESYRVLTYCGNLDQMMPCVVTSEHYRTWKWSSSDDFIKAV 429
E + D + S K E++ +Y+VL Y G LD ++ +T W S ++ KA
Sbjct: 175 EKYLREDTVQSVKPWLTEIMNNYKVLIYNGQLDIIVAAALTERSLMGMDWKGSQEYKKAE 234
Query: 430 RNPY-MFKN--RLAGYHKTGGNLTELIIREPVTWRPWTRPTK 546
+ + +FK+ +AGY + G+ ++IIR P+ +P +
Sbjct: 235 KKVWKIFKSDSEVAGYIRQAGDFHQVIIRGGGHILPYDQPLR 276
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,234,067
Number of Sequences: 237096
Number of extensions: 2026974
Number of successful extensions: 7320
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7320
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -