Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10686X
(349 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 103 8e-22
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 95 3e-19
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 89 1e-17
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 84 6e-16
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 81 5e-15
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 80 9e-15
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 78 5e-14
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 73 1e-12
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 71 6e-12
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 71 6e-12
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 61 4e-09
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 56 2e-07
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 55 3e-07
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 55 4e-07
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 42 0.004
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 36 0.15
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 34 0.59
UniRef50_Q1GUN7 Cluster: PASs1-related protein precursor; n=3; S... 31 5.5
UniRef50_Q4DTB0 Cluster: Retrotransposon hot spot (RHS) protein,... 31 5.5
UniRef50_Q2FRK0 Cluster: Putative PAS/PAC sensor protein; n=1; M... 31 5.5
UniRef50_UPI000051AB47 Cluster: PREDICTED: similar to CG2162-PA;... 31 7.2
UniRef50_Q9A4F9 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
UniRef50_A6PPZ3 Cluster: ROK family protein; n=1; Victivallis va... 31 7.2
UniRef50_A7AVN6 Cluster: Exosome component 10, putative; n=1; Ba... 31 7.2
UniRef50_A1C4P5 Cluster: Cytokinesis regulator (Byr4), putative;... 31 7.2
UniRef50_A4F8K2 Cluster: ABC sugar transporter, permease compone... 30 9.5
UniRef50_A3XS63 Cluster: Putative uncharacterized protein; n=4; ... 30 9.5
UniRef50_A3WGI1 Cluster: Putative uncharacterized protein; n=1; ... 30 9.5
UniRef50_Q6C5N4 Cluster: Yarrowia lipolytica chromosome E of str... 30 9.5
UniRef50_Q8FNV0 Cluster: Isoleucyl-tRNA synthetase; n=25; Bacter... 30 9.5
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 103 bits (247), Expect = 8e-22
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = +3
Query: 93 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEGSLADLK 257
+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQGTKIAS+GLKGRVFE SLADL+
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQ 75
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2
Query: 269 AERSVRKFRLIAEYVQGRNVLCNFHGM 349
AERS RKF+L+AE V GR+VL NFHGM
Sbjct: 80 AERSFRKFKLVAESVNGRDVLTNFHGM 106
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 95.1 bits (226), Expect = 3e-19
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +3
Query: 93 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEGSLADLK 257
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFE SLADL+
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQ 75
Score = 38.7 bits (86), Expect = 0.027
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +2
Query: 272 ERSVRKFRLIAEYVQGRNVLCNFHGM 349
E + RKF+LI E VQG+N L NFHGM
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGM 103
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 89.4 bits (212), Expect = 1e-17
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = +3
Query: 99 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEGSLADLK 257
DPF +KDWYD+KAPS+F R VG TLV+RTQGTKIASEGLK RVFE SLADL+
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQ 469
Score = 35.9 bits (79), Expect = 0.19
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +2
Query: 272 ERSVRKFRLIAEYVQGRNVLCNFHGM 349
+++ RK RL AE VQGRNVL NF GM
Sbjct: 473 DQAYRKIRLRAEDVQGRNVLTNFWGM 498
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 84.2 bits (199), Expect = 6e-16
Identities = 38/54 (70%), Positives = 46/54 (85%)
Frame = +3
Query: 96 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEGSLADLK 257
VD ++KDWYD+KAP+MF+ R +G TLV RTQGTKIAS+GLKG VFE SLADL+
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMSLADLQ 75
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 272 ERSVRKFRLIAEYVQGRNVLCNFHGM 349
E + RKF+LI E VQG+ L NF M
Sbjct: 78 EVAFRKFKLITEDVQGKRCLINFRSM 103
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 81.0 bits (191), Expect = 5e-15
Identities = 38/55 (69%), Positives = 46/55 (83%)
Frame = +3
Query: 93 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEGSLADLK 257
+VDPF++KDWYDV AP+MF+ R +G TLV RTQGTKIAS+ GRVFE SLADL+
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD---GRVFEVSLADLQ 72
Score = 37.1 bits (82), Expect = 0.083
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 272 ERSVRKFRLIAEYVQGRNVLCNFHGM 349
E + RKF+LI E VQG+N L NFHG+
Sbjct: 75 EVAFRKFKLITEDVQGKNCLTNFHGV 100
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 80.2 bits (189), Expect = 9e-15
Identities = 39/58 (67%), Positives = 47/58 (81%), Gaps = 4/58 (6%)
Frame = +3
Query: 96 VDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQGTKIASEGLKGRVFEGSLADLK 257
VDPFTRK+WY V+AP+ F K +VG T VNRTQGTK+AS+GLKGRV+E SLAD+K
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMK 73
Score = 34.3 bits (75), Expect = 0.59
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +2
Query: 284 RKFRLIAEYVQGRNVLCNFHGM 349
RK +L AE V+GRNVL NF+GM
Sbjct: 81 RKIKLRAEEVEGRNVLTNFYGM 102
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 77.8 bits (183), Expect = 5e-14
Identities = 34/54 (62%), Positives = 43/54 (79%)
Frame = +3
Query: 99 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEGSLADLKR 260
DPF RKDWY +KAP+ F+ R VG TLVNR+ G K A++ LKGR+FE SLADL++
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQK 75
Score = 31.5 bits (68), Expect = 4.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 272 ERSVRKFRLIAEYVQGRNVLCNFHGM 349
+ + RK +L + VQG+N L NFHG+
Sbjct: 78 DHAFRKIKLRVDEVQGKNCLTNFHGL 103
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 72.9 bits (171), Expect = 1e-12
Identities = 32/54 (59%), Positives = 42/54 (77%)
Frame = +3
Query: 93 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEGSLADL 254
I +PF++K+WY+VK P F +R VG +VN+T GT+IASE LKGRV E +LADL
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADL 75
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 70.9 bits (166), Expect = 6e-12
Identities = 30/55 (54%), Positives = 42/55 (76%)
Frame = +3
Query: 99 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEGSLADLKRT 263
+ RK+WYDV AP+ F KRQ T+ N+TQGT+IA++ L+GRVFE +LADL ++
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQS 77
Score = 33.9 bits (74), Expect = 0.77
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = +2
Query: 176 CQPYPGNENCFGRIEGKSFRRVPG*SKADTGAERSVRKFRLIAEYVQGRNVLCNFHGM 349
C G + G+ F G E + RK R + VQGRN+L FH M
Sbjct: 49 CNKTQGTRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSM 106
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 70.9 bits (166), Expect = 6e-12
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = +3
Query: 96 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEGSLADLK 257
+DP +RK+WYD +AP FS + G TLV ++ G +IASE +KGRV E +LADLK
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLK 76
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 61.3 bits (142), Expect = 4e-09
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = +3
Query: 96 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEGSLADLK 257
+DP RK+W+++ AP F+ G T +N++ GT +A+E +KGRV E SLADL+
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQ 72
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 56.0 bits (129), Expect = 2e-07
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = +3
Query: 111 RKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEGSLADLK--RTLARKGRS 284
+KD YDVKA +MF+ R +G T V R Q TK+ S GL G VFE SLA L+ + + RK +
Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQNDKVVVRKFKL 71
Query: 285 ANSD 296
D
Sbjct: 72 ITED 75
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 281 VRKFRLIAEYVQGRNVLCNFHGM 349
VRKF+LI E ++G+N L N +GM
Sbjct: 66 VRKFKLITEDMRGKNGLTNSYGM 88
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 55.2 bits (127), Expect = 3e-07
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = -3
Query: 251 ISQGPFENSSLQSFRSNFRSLGTVDKRGADLPLAEHRRSLDIVPIFASEWVDNLLLNTFF 72
ISQG ++S L+ FR + S + +K A++ AE RR L+++P+ S+ V LLL++ F
Sbjct: 82 ISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDRRRLNVIPVLLSKRVGCLLLSSLF 141
Query: 71 TALGQAFIFPDRHVQ 27
LG +FPD H +
Sbjct: 142 -PLGNPLVFPDDHCE 155
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 54.8 bits (126), Expect = 4e-07
Identities = 22/52 (42%), Positives = 35/52 (67%)
Frame = +3
Query: 99 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEGSLADL 254
DP+ +K+WY V AP+ F R +G T V +T G ++A++ + RV+E +L DL
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDL 71
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 41.5 bits (93), Expect = 0.004
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +3
Query: 93 IVDPFTRKDWYDVKAPSMFSKRQVGTT 173
++D F++KDWYDVKA +MF+ R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 36.3 bits (80), Expect = 0.15
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +3
Query: 96 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEGSLADL 254
VD F K+WY V AP+ F++ +G TL + G I GRV E +L D+
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDV 54
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 34.3 bits (75), Expect = 0.59
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +2
Query: 284 RKFRLIAEYVQGRNVLCNFHGM 349
RKF+L E VQGR+ L NFHGM
Sbjct: 8 RKFKLQVEDVQGRHCLTNFHGM 29
>UniRef50_Q1GUN7 Cluster: PASs1-related protein precursor; n=3;
Sphingomonadaceae|Rep: PASs1-related protein precursor -
Sphingopyxis alaskensis (Sphingomonas alaskensis)
Length = 323
Score = 31.1 bits (67), Expect = 5.5
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = -1
Query: 292 EFADRPFRASVRFRSARDPSKTLPFNPSEAIFVP---WVRLTSVVPTCLLLN 146
+F F A RFR A D ++ P +AIFVP W + P L+N
Sbjct: 189 DFRAPDFAAHPRFRDALDRAQVADLEPGDAIFVPSLWWHHVEGRAPLNALVN 240
>UniRef50_Q4DTB0 Cluster: Retrotransposon hot spot (RHS) protein,
putative; n=2; Trypanosoma cruzi|Rep: Retrotransposon
hot spot (RHS) protein, putative - Trypanosoma cruzi
Length = 827
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 92 DCRPIHSQRLVRCQGSVYVQQEASRHHACQP 184
+ RP +R RC +VY QQ ++RHH P
Sbjct: 658 ELRPSPQRRSHRCALAVYSQQRSTRHHVLPP 688
>UniRef50_Q2FRK0 Cluster: Putative PAS/PAC sensor protein; n=1;
Methanospirillum hungatei JF-1|Rep: Putative PAS/PAC
sensor protein - Methanospirillum hungatei (strain JF-1
/ DSM 864)
Length = 511
Score = 31.1 bits (67), Expect = 5.5
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 173 ACQPYPGNENCFGRIEGKSFRRVPG*SKADTGAERSVRKFRLIAEYVQGRNVLCNFHG 346
AC Y N G IE S R + K+ E + RK+R++AEY + ++ F G
Sbjct: 252 ACPLYDNEGNITGYIE--SIRDITEVKKSARKIEENERKYRVLAEYSRDAILIIGFDG 307
>UniRef50_UPI000051AB47 Cluster: PREDICTED: similar to CG2162-PA;
n=2; Apocrita|Rep: PREDICTED: similar to CG2162-PA -
Apis mellifera
Length = 656
Score = 30.7 bits (66), Expect = 7.2
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -2
Query: 315 CTYSAINLNLRTDLSAPVSALDQPGTLRKLFPSILPKQ 202
C YS +N+N D S + +P ++++ P +LP++
Sbjct: 360 CIYSEVNINEEIDRSDKYTVQKEPQAVKEVIPIVLPEK 397
>UniRef50_Q9A4F9 Cluster: Putative uncharacterized protein; n=1;
Caulobacter vibrioides|Rep: Putative uncharacterized
protein - Caulobacter crescentus (Caulobacter
vibrioides)
Length = 264
Score = 30.7 bits (66), Expect = 7.2
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -3
Query: 344 RGSCRAHSVLAHIRRLI*ICGPTFPRQCPL*ISQGP--FENSSLQSFRSNFRSLGTVDKR 171
RGS A +V A RR IC P PR+C GP S++++ + R G + R
Sbjct: 160 RGSSSAVAVPAASRRSHQICAPHGPRRCSFQKPSGPALATTSTVRARKITDRVAGIIQLR 219
Query: 170 GADL 159
G L
Sbjct: 220 GPSL 223
>UniRef50_A6PPZ3 Cluster: ROK family protein; n=1; Victivallis
vadensis ATCC BAA-548|Rep: ROK family protein -
Victivallis vadensis ATCC BAA-548
Length = 408
Score = 30.7 bits (66), Expect = 7.2
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 58 CPRAVKKVLRRRLSTHSLAKIGTMSRLRLCSARGKSAPR 174
CP+ ++ R++ ++ L+ +R+R C K+APR
Sbjct: 344 CPQCTLDIVERKMGSYGLSNWHLSTRIRSCKCTMKTAPR 382
>UniRef50_A7AVN6 Cluster: Exosome component 10, putative; n=1;
Babesia bovis|Rep: Exosome component 10, putative -
Babesia bovis
Length = 879
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -2
Query: 324 FRPCTYSAINLNLRTDLSAPVSALDQPGTLRKLFPSILPKQFSFPGY 184
F P S L +RTD PV + PG R+ P + P GY
Sbjct: 212 FNPLDPSGSGLGIRTDYPGPVES--DPGLERRFVPKVYPSYDYLEGY 256
>UniRef50_A1C4P5 Cluster: Cytokinesis regulator (Byr4), putative;
n=5; Trichocomaceae|Rep: Cytokinesis regulator (Byr4),
putative - Aspergillus clavatus
Length = 1006
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 239 PFENSSLQSFRSNFRSLGTVDKRGADLPLAEHRRSLDIVPIFASE 105
P + S++ + SN R VD+ G DL + R + +P ASE
Sbjct: 537 PQHDDSMRPYPSNIRPKTPVDRVGNDLRYSNRRSQMPFIPAGASE 581
>UniRef50_A4F8K2 Cluster: ABC sugar transporter, permease component;
n=1; Saccharopolyspora erythraea NRRL 2338|Rep: ABC
sugar transporter, permease component -
Saccharopolyspora erythraea (strain NRRL 23338)
Length = 385
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = -2
Query: 321 RPCTYSAINLN-LRTDLSAPVSALDQPGTLRKL 226
RP T +A NL+ + T+L APV+A+D P T K+
Sbjct: 338 RPVTPAAQNLSTVLTNLLAPVAAIDPPKTAEKM 370
>UniRef50_A3XS63 Cluster: Putative uncharacterized protein; n=4;
Vibrionales|Rep: Putative uncharacterized protein -
Vibrio sp. MED222
Length = 1024
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 158 PLAEHRRSLDIVPIFASEWVDNLLLNTFFTALGQAFIFPDRHVQR 24
P A + LD+VP + + D LL +++ +G IFP ++QR
Sbjct: 801 PQAFTQEYLDLVPDSDNSFGDALLADSYLKLIGLEGIFPQENIQR 845
>UniRef50_A3WGI1 Cluster: Putative uncharacterized protein; n=1;
Erythrobacter sp. NAP1|Rep: Putative uncharacterized
protein - Erythrobacter sp. NAP1
Length = 301
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -1
Query: 160 CLLLNIDGALTSYQSLRVNGSTI 92
C LL+IDGA +Y SL V+G T+
Sbjct: 174 CFLLSIDGAAIAYLSLPVSGRTL 196
>UniRef50_Q6C5N4 Cluster: Yarrowia lipolytica chromosome E of strain
CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome E of
strain CLIB 122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 348
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -1
Query: 277 PFRASVRFRSARDPSKTLPFNPSEAIFVPWVRLTSVVPTCLLLNIDGA 134
P A+ + A + + +PS + VP +R TSV+P+ L+ D A
Sbjct: 63 PAAATAAEQPAANSPPAVEIDPSSGLHVPTLRATSVIPSLSLMYADTA 110
>UniRef50_Q8FNV0 Cluster: Isoleucyl-tRNA synthetase; n=25;
Bacteria|Rep: Isoleucyl-tRNA synthetase -
Corynebacterium efficiens
Length = 1054
Score = 30.3 bits (65), Expect = 9.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 102 PFTRKDWYDVKAPSMFSKRQVGTT 173
PF KDW+D AP+ F +G T
Sbjct: 568 PFENKDWFDTHAPADFIVEYIGQT 591
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 346,639,614
Number of Sequences: 1657284
Number of extensions: 6483688
Number of successful extensions: 17367
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17363
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 11131607110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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