Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10686X
         (349 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   0.68 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    20   6.3  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    20   6.3  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    20   8.3  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    20   8.3  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    20   8.3  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.4 bits (48), Expect = 0.68
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -3

Query: 215 SFRSNFRSLGTVDKRGADLPLAEHRRSLDIVP-IFASEWVDNLLLNTFFTAL 63
           S  S+  SL  + K  A LP+ +H R   +VP ++ + +   L L +F  ++
Sbjct: 2   SLYSSINSLVLISKIFALLPVKKHHRLEKLVPCVYLTSFSVVLSLGSFIVSV 53


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 162 VGTTLVNRTQGTKIASEGL 218
           +GT L++  Q  KIA++GL
Sbjct: 63  LGTFLISGFQMQKIATKGL 81


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 162 VGTTLVNRTQGTKIASEGL 218
           +GT L++  Q  KIA++GL
Sbjct: 63  LGTFLISGFQMQKIATKGL 81


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 46  KIKACPRAVKKVLRRRLSTHSLAK 117
           ++K   R VK+VLR   S H +++
Sbjct: 360 EMKYLERCVKEVLRLYPSVHFISR 383


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 46  KIKACPRAVKKVLRRRLSTHSLAK 117
           ++K   R +K+VLR   S H +++
Sbjct: 44  ELKYMERVIKEVLRLYPSVHYISR 67


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 46  KIKACPRAVKKVLRRRLSTHSLAK 117
           ++K   R VK+VLR   S H +++
Sbjct: 360 EMKYLERCVKEVLRLYPSVHFISR 383


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,625
Number of Sequences: 336
Number of extensions: 1479
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)