Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10686X
         (349 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical pr...    98   1e-21
U80836-9|AAB37895.1|  303|Caenorhabditis elegans Hypothetical pr...    26   6.4  
AC006713-1|AAK68407.2|  310|Caenorhabditis elegans Hypothetical ...    26   6.4  
Z81104-4|CAE17891.1|  303|Caenorhabditis elegans Hypothetical pr...    26   8.5  
Z70680-1|CAA94571.1|  221|Caenorhabditis elegans Hypothetical pr...    26   8.5  
U50191-6|AAK31554.2|  235|Caenorhabditis elegans Hypothetical pr...    26   8.5  

>Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical
           protein F56F3.5 protein.
          Length = 257

 Score = 98.3 bits (234), Expect = 1e-21
 Identities = 44/58 (75%), Positives = 51/58 (87%)
 Frame = +3

Query: 96  VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEGSLADLKRTLA 269
           VDPF+RK+WYD+KAP+MF+ RQVG TL+NRTQGTKIASEGLKGRVFE SL DL  + A
Sbjct: 20  VDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDLNNSEA 77



 Score = 40.7 bits (91), Expect = 3e-04
 Identities = 18/27 (66%), Positives = 21/27 (77%)
 Frame = +2

Query: 269 AERSVRKFRLIAEYVQGRNVLCNFHGM 349
           +E   RKF+LIAE VQG+NVL NFH M
Sbjct: 75  SEADFRKFKLIAEDVQGKNVLTNFHAM 101


>U80836-9|AAB37895.1|  303|Caenorhabditis elegans Hypothetical
           protein B0432.10 protein.
          Length = 303

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 316 LHIFGD*SEFADRPFRASVRFR 251
           LH++    EF DRPF A + FR
Sbjct: 48  LHVYFRPEEFLDRPFVADIIFR 69


>AC006713-1|AAK68407.2|  310|Caenorhabditis elegans Hypothetical
           protein Y119D3A.4 protein.
          Length = 310

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 333 QSTFRPCTYSAINLNLRTDLS 271
           +STFR C  S IN+N   +L+
Sbjct: 246 RSTFRKCVISVINVNFNPELA 266


>Z81104-4|CAE17891.1|  303|Caenorhabditis elegans Hypothetical
           protein M199.6 protein.
          Length = 303

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 137 SVYVQQEASRHHACQPYPGNENCFGRIEG 223
           S+Y++ +  R   CQ  P  ENC   I+G
Sbjct: 198 SIYMRIDGQRTEECQETPTTENCMS-IDG 225


>Z70680-1|CAA94571.1|  221|Caenorhabditis elegans Hypothetical
           protein C25G4.2 protein.
          Length = 221

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 331 EHIPSLHIFGD*SEFADRP 275
           +  PS+H+FGD  E   RP
Sbjct: 154 KEFPSMHVFGDADEIVARP 172


>U50191-6|AAK31554.2|  235|Caenorhabditis elegans Hypothetical
           protein T14B4.8 protein.
          Length = 235

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = -1

Query: 205 AIFVPWVRLTSVVPTCLLLNIDGALTSYQSLRVNG 101
           + F+P++R    VPT  +++ +G +  Y +L  +G
Sbjct: 119 SFFIPFLRPRRTVPTFSIIDWNGEVLGYYALASDG 153


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,916,895
Number of Sequences: 27780
Number of extensions: 151426
Number of successful extensions: 406
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 406
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)