Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10684
         (423 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    48   8e-05
UniRef50_Q01E31 Cluster: Dual specificity phosphatase Cdc25; n=3...    35   0.79 
UniRef50_Q0BU79 Cluster: Hypothetical cytosolic protein; n=1; Gr...    34   1.4  
UniRef50_Q9VUQ9 Cluster: CG6498-PA; n=4; Eumetazoa|Rep: CG6498-P...    32   4.2  
UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12...    32   4.2  
UniRef50_Q4TGD5 Cluster: Chromosome undetermined SCAF3766, whole...    32   5.6  
UniRef50_Q07PL8 Cluster: AAA ATPase, central domain protein; n=2...    32   5.6  
UniRef50_Q9TVQ2 Cluster: Putative uncharacterized protein; n=2; ...    32   5.6  
UniRef50_O44565 Cluster: Laminin related. see also lmb-protein 1...    32   5.6  
UniRef50_Q01A03 Cluster: Kelch repeat:Kelch; n=3; Ostreococcus|R...    31   7.4  
UniRef50_A5AL10 Cluster: Putative uncharacterized protein; n=1; ...    31   7.4  
UniRef50_Q61F76 Cluster: Putative uncharacterized protein CBG117...    31   7.4  
UniRef50_Q84Z22 Cluster: Putative uncharacterized protein OSJNBa...    31   9.7  
UniRef50_Q29NL0 Cluster: GA18222-PA; n=1; Drosophila pseudoobscu...    31   9.7  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 48.0 bits (109), Expect = 8e-05
 Identities = 22/45 (48%), Positives = 27/45 (60%)
 Frame = +3

Query: 120 IYGTGGLLTPLVAPVLXXXXXXXXXXXXXXXXXXYYGNLVAGSIV 254
           IYGTGGLLTP+VAP+L                  YYGN+VAGS++
Sbjct: 17  IYGTGGLLTPIVAPMLGFGSAGIAAGSTAAAAQAYYGNVVAGSVI 61


>UniRef50_Q01E31 Cluster: Dual specificity phosphatase Cdc25; n=3;
           Ostreococcus|Rep: Dual specificity phosphatase Cdc25 -
           Ostreococcus tauri
          Length = 517

 Score = 34.7 bits (76), Expect = 0.79
 Identities = 18/39 (46%), Positives = 20/39 (51%)
 Frame = -1

Query: 351 TEKVRSWSDVENG*CLASPHGVGATMAAAVNCAQCCRPL 235
           T   R+ SD  NG C+    G  A MAAA   A  CRPL
Sbjct: 216 TPFARALSDASNGRCVDGGQGGAAAMAAAAASAMPCRPL 254


>UniRef50_Q0BU79 Cluster: Hypothetical cytosolic protein; n=1;
           Granulibacter bethesdensis CGDNIH1|Rep: Hypothetical
           cytosolic protein - Granulobacter bethesdensis (strain
           ATCC BAA-1260 / CGDNIH1)
          Length = 90

 Score = 33.9 bits (74), Expect = 1.4
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +2

Query: 56  QKLKEHGA--SSCISGKRGRRCCNIWHWGSVDSISGSRAR 169
           Q L+EHG    S ++G+R  RC N WH G  D +   R R
Sbjct: 42  QALREHGTFQGSMLAGRRILRC-NPWHQGGYDPVPAGRCR 80


>UniRef50_Q9VUQ9 Cluster: CG6498-PA; n=4; Eumetazoa|Rep: CG6498-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 2139

 Score = 32.3 bits (70), Expect = 4.2
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +2

Query: 176 LSGNSGRKHSRCCTSILRKFSGRQHCAQLTAAA 274
           LSG+S   HSR  T++LRK S +QH   L A +
Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQHTNSLRAVS 220


>UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12;
           Bacilli|Rep: Pyrrolidone-carboxylate peptidase -
           Bacillus subtilis
          Length = 215

 Score = 32.3 bits (70), Expect = 4.2
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 35  LRIARREQKLKEHGASSCISGKRGRRCCNIWHWGSVDSIS 154
           L + R   K+KEHG  + +S   G   CN   +G +D IS
Sbjct: 117 LPVKRMTAKMKEHGIPAAVSYTAGTFVCNYLFYGLMDHIS 156


>UniRef50_Q4TGD5 Cluster: Chromosome undetermined SCAF3766, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF3766,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 328

 Score = 31.9 bits (69), Expect = 5.6
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -1

Query: 165 AREPLMESTDPQCHILQHRRPRLPLMQLE 79
           A +PL   T+P+  +LQ+RRP+L L  L+
Sbjct: 5   AEQPLSLRTEPKLRVLQYRRPKLELQLLK 33


>UniRef50_Q07PL8 Cluster: AAA ATPase, central domain protein; n=2;
           Rhodopseudomonas palustris BisA53|Rep: AAA ATPase,
           central domain protein - Rhodopseudomonas palustris
           (strain BisA53)
          Length = 642

 Score = 31.9 bits (69), Expect = 5.6
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -1

Query: 354 KTEKVRSWSDVENG*CLASPHGVGATMAAAVNCAQCCRPLNFRSM 220
           KT +++ WSDV+ G  ++ P G G T+      A C  P++  S+
Sbjct: 229 KTGRIQ-WSDVDRGALISGPSGTGKTLFVQALGASCGVPVHAHSL 272


>UniRef50_Q9TVQ2 Cluster: Putative uncharacterized protein; n=2;
            Caenorhabditis|Rep: Putative uncharacterized protein -
            Caenorhabditis elegans
          Length = 1651

 Score = 31.9 bits (69), Expect = 5.6
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
 Frame = +2

Query: 68   EHGASSCISGKRGRRC---CNIWHWGSVDSISGSRARFQLSGNSGRKHSRCCTSILRKFS 238
            EH   SC+SG  G +C   C   +    D ISG       S   G +  +C    L+ + 
Sbjct: 1195 EHCEKSCVSGHYGAKCEETCECENGALCDPISG-----HCSCQPGWRGKKCNRPCLKGYF 1249

Query: 239  GRQHCAQ 259
            GR HC+Q
Sbjct: 1250 GR-HCSQ 1255


>UniRef50_O44565 Cluster: Laminin related. see also lmb-protein 1;
            n=2; Caenorhabditis|Rep: Laminin related. see also
            lmb-protein 1 - Caenorhabditis elegans
          Length = 1067

 Score = 31.9 bits (69), Expect = 5.6
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +2

Query: 83   SCISGKRGRRC--CNIWHWGSVDSISGSRARFQLSGN 187
            +C SG +G RC  C   HWGS   + G+  R   +GN
Sbjct: 973  NCKSGYQGERCGECAQNHWGSPREVGGTCERCDCNGN 1009


>UniRef50_Q01A03 Cluster: Kelch repeat:Kelch; n=3; Ostreococcus|Rep:
           Kelch repeat:Kelch - Ostreococcus tauri
          Length = 1055

 Score = 31.5 bits (68), Expect = 7.4
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 375 KCILIPNKTEKVRSWSDVENG*CLASPHGVGATMAAAVNCA 253
           +C+    K E+VR+W       C + P G G   A+A+ CA
Sbjct: 32  ECVAAKKKVERVRAWLAKGGALCASGPSGCG--KASAITCA 70


>UniRef50_A5AL10 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 495

 Score = 31.5 bits (68), Expect = 7.4
 Identities = 23/75 (30%), Positives = 31/75 (41%)
 Frame = +2

Query: 104 GRRCCNIWHWGSVDSISGSRARFQLSGNSGRKHSRCCTSILRKFSGRQHCAQLTAAAMVA 283
           G RC  IW W ++     S A+ +L   SG  H R   S L++   R+H           
Sbjct: 334 GSRCSRIWVWRNI-----SAAQLRLGRXSGLPHRRKKXSALQQILHREHFQHQFHVTAGD 388

Query: 284 PTP*GDAKHHPFSTS 328
           P+P     H  FS S
Sbjct: 389 PSP--HQLHTTFSVS 401


>UniRef50_Q61F76 Cluster: Putative uncharacterized protein CBG11746;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG11746 - Caenorhabditis
           briggsae
          Length = 985

 Score = 31.5 bits (68), Expect = 7.4
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = -1

Query: 306 LASPHGVGATMAAAVNCAQCCRPLNFRSMLVQQRL 202
           LA+     A  AAA N  Q   P NF ++L QQRL
Sbjct: 884 LAAAQAAAAAQAAAANRQQQATPQNFEALLQQQRL 918


>UniRef50_Q84Z22 Cluster: Putative uncharacterized protein
           OSJNBa0036M16.123; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBa0036M16.123 - Oryza sativa subsp. japonica (Rice)
          Length = 306

 Score = 31.1 bits (67), Expect = 9.7
 Identities = 21/58 (36%), Positives = 25/58 (43%)
 Frame = -1

Query: 279 TMAAAVNCAQCCRPLNFRSMLVQQRLCFLPLFPLS*NRAREPLMESTDPQCHILQHRR 106
           T A AV+  QCCR        +      LP  PL   RA  PL   T P+    +HRR
Sbjct: 68  TAANAVDQPQCCRRRQAVVATIAMNSASLPQSPLP--RAPAPLPPPTSPRAPRCRHRR 123


>UniRef50_Q29NL0 Cluster: GA18222-PA; n=1; Drosophila
           pseudoobscura|Rep: GA18222-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 514

 Score = 31.1 bits (67), Expect = 9.7
 Identities = 20/88 (22%), Positives = 34/88 (38%)
 Frame = -1

Query: 363 IPNKTEKVRSWSDVENG*CLASPHGVGATMAAAVNCAQCCRPLNFRSMLVQQRLCFLPLF 184
           +P       S S + N   + +P    +    +  C  C RP   R  L +  +      
Sbjct: 338 LPRSCSSANSSSSLSNDATVTAPPMRPSRSRRSYPCPLCHRPFGTRHNLKRHYMIHTGEK 397

Query: 183 PLS*NRAREPLMESTDPQCHILQHRRPR 100
           P S  + R+P  E +  + H++ H R R
Sbjct: 398 PFSCTKCRKPFRECSTLKKHMVTHVRDR 425


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 406,753,318
Number of Sequences: 1657284
Number of extensions: 7454886
Number of successful extensions: 16649
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16634
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)