Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10683
         (613 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    26   0.29 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.38 
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    24   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.7  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   4.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.2  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   6.2  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 303 WVRHCCRLLSETIPG 259
           WV H C+L S+ +PG
Sbjct: 493 WVPHSCKLTSKEVPG 507



 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = -1

Query: 445 KHFEEL*EPIQLLYHSSGLVSHKDSFDNQMHHV 347
           +H+EE   P+ L +H++ L ++ +  D  ++ V
Sbjct: 411 RHYEENRAPLGLYFHAAWLKNNPEFLDAFLYWV 443


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
 Frame = +1

Query: 277 QQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYP--YVTPTQSYDTTIEWVPTTPQNASI 450
           ++ AA   PG  P P++PR           +  P       +S D+ ++  P  P   S+
Sbjct: 49  EEEAASPTPGDVPTPSSPRS--ISEDPLNCRDLPNSRCNSRESSDSLVQ--PRCPSGESM 104

Query: 451 LSEKAVV 471
           LSE+A +
Sbjct: 105 LSERAAL 111


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
 Frame = +1

Query: 253 IQPGYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPY----VTPTQSY 402
           I PGY  G   A +  P +   P     H +PH    +  +PY    V PT ++
Sbjct: 12  IHPGYMDGGAGAGLYEPHVAHRPGLQGLHHSPH--LNHAMHPYHANHVNPTANH 63


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 276  TTTCSNVLPRNHASTNCTSRPCDTTW 353
            TTT          +T+ T+RP  T W
Sbjct: 1054 TTTTRRTTTTRPTTTSTTTRPTTTNW 1079


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 91  TEIENV*ISIRKPKLSPTP 147
           T++    + +R PK+ PTP
Sbjct: 74  TKVHGTTVRVRPPKVYPTP 92


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 91  TEIENV*ISIRKPKLSPTP 147
           T++    + +R PK+ PTP
Sbjct: 388 TKVHGTTVRVRPPKVYPTP 406


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +2

Query: 449 YLARRQWWLVMKVTMVVPFGDQVSVPRRSNPRQVMRETFL 568
           Y  R  W L  K  M+    D++ +  R    QVM   +L
Sbjct: 668 YGGRLVWTLPGKTKMIAHLKDKMKIRHRKRWSQVMYMYYL 707


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +2

Query: 449 YLARRQWWLVMKVTMVVPFGDQVSVPRRSNPRQVMRETFL 568
           Y  R  W L  K  M+    D++ +  R    QVM   +L
Sbjct: 668 YGGRLVWTLPGKTKMIAHLKDKMKIRHRKRWSQVMYMYYL 707


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 91  TEIENV*ISIRKPKLSPTP 147
           T++    + +R PK+ PTP
Sbjct: 621 TKVHGTTVRVRPPKVYPTP 639


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 91  TEIENV*ISIRKPKLSPTP 147
           T++    + +R PK+ PTP
Sbjct: 621 TKVHGTTVRVRPPKVYPTP 639


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +2

Query: 449 YLARRQWWLVMKVTMVVPFGDQVSVPRRSNPRQVMRETFL 568
           Y  R  W L  K  M+    D++ +  R    QVM   +L
Sbjct: 668 YGGRLVWTLPGKTKMIAHLKDKMKIRHRKRWSQVMYMYYL 707


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +2

Query: 449 YLARRQWWLVMKVTMVVPFGDQVSVPRRSNPRQVMRETFL 568
           Y  R  W L  K  M+    D++ +  R    QVM   +L
Sbjct: 668 YGGRLVWTLPGKTKMIAHLKDKMKIRHRKRWSQVMYMYYL 707


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 124 KPKLSPTPRTNLPIAL 171
           KPK+   P+T LP+ L
Sbjct: 42  KPKMPLLPKTPLPLTL 57


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +1

Query: 328 PRGHVTPHGA 357
           P G++TPHG+
Sbjct: 250 PTGNITPHGS 259


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,658
Number of Sequences: 336
Number of extensions: 3832
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)