Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10683
(613 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79198-1|CAA55790.1| 1938|Homo sapiens host cell factor protein. 32 1.8
BC030560-1|AAH30560.1| 551|Homo sapiens HCFC1 protein protein. 32 1.8
BC019887-1|AAH19887.1| 551|Homo sapiens Unknown (protein for IM... 32 1.8
U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein. 31 2.4
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 31 2.4
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 31 2.4
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 31 2.4
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 31 2.4
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 31 2.4
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 31 2.4
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 31 2.4
Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. 31 3.2
AK095343-1|BAC04535.1| 1043|Homo sapiens protein ( Homo sapiens ... 31 4.2
BC010738-1|AAH10738.2| 490|Homo sapiens TMEM112 protein protein. 30 5.6
AK025955-1|BAB15295.1| 458|Homo sapiens protein ( Homo sapiens ... 30 5.6
AK022743-1|BAB14218.1| 567|Homo sapiens protein ( Homo sapiens ... 30 5.6
AE006465-5|AAK61259.1| 567|Homo sapiens possible integral membr... 30 5.6
AB075873-1|BAD38655.1| 563|Homo sapiens putative protein produc... 30 5.6
BC117255-1|AAI17256.1| 1048|Homo sapiens Sin3A-associated protei... 29 9.8
BC017453-1|AAH17453.2| 693|Homo sapiens SAP130 protein protein. 29 9.8
AY220791-1|AAO63591.1| 1048|Homo sapiens SIN3A-associated protei... 29 9.8
AK055979-1|BAB71063.1| 710|Homo sapiens protein ( Homo sapiens ... 29 9.8
AK022823-1|BAB14261.1| 613|Homo sapiens protein ( Homo sapiens ... 29 9.8
AC012306-2|AAY14878.1| 732|Homo sapiens unknown protein. 29 9.8
>X79198-1|CAA55790.1| 1938|Homo sapiens host cell factor protein.
Length = 1938
Score = 31.9 bits (69), Expect = 1.8
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 283 PAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTP 435
P+ + P +PAP A V P G P P TTI+ +PT P
Sbjct: 319 PSVPANPPKSPAPAAAAPAVQPLTQVGITLLPQAAPAPPTTTTIQVLPTVP 369
>BC030560-1|AAH30560.1| 551|Homo sapiens HCFC1 protein protein.
Length = 551
Score = 31.9 bits (69), Expect = 1.8
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 283 PAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTP 435
P+ + P +PAP A V P G P P TTI+ +PT P
Sbjct: 418 PSVPANPPKSPAPAAAAPAVQPLTQVGITLLPQAAPAPPTTTTIQVLPTVP 468
>BC019887-1|AAH19887.1| 551|Homo sapiens Unknown (protein for
IMAGE:5142023) protein.
Length = 551
Score = 31.9 bits (69), Expect = 1.8
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 283 PAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTP 435
P+ + P +PAP A V P G P P TTI+ +PT P
Sbjct: 418 PSVPANPPKSPAPAAAAPAVQPLTQVGITLLPQAAPAPPTTTTIQVLPTVP 468
>U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein.
Length = 358
Score = 31.5 bits (68), Expect = 2.4
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +1
Query: 283 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 405
PAA+ G +P PT P G P + G YP +P D
Sbjct: 167 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVD 209
>BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.5 bits (68), Expect = 2.4
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +1
Query: 283 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 405
PAA+ G +P PT P G P + G YP +P D
Sbjct: 274 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVD 316
>BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein.
Length = 407
Score = 31.5 bits (68), Expect = 2.4
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +1
Query: 283 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 405
PAA+ G +P PT P G P + G YP +P D
Sbjct: 216 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVD 258
>AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 465
Score = 31.5 bits (68), Expect = 2.4
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +1
Query: 283 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 405
PAA+ G +P PT P G P + G YP +P D
Sbjct: 274 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPVAPVD 316
>AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.5 bits (68), Expect = 2.4
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +1
Query: 283 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 405
PAA+ G +P PT P G P + G YP +P D
Sbjct: 274 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVD 316
>AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.5 bits (68), Expect = 2.4
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +1
Query: 283 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 405
PAA+ G +P PT P G P + G YP +P D
Sbjct: 274 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVD 316
>AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 462
Score = 31.5 bits (68), Expect = 2.4
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +1
Query: 283 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 405
PAA+ G +P PT P G P + G YP +P D
Sbjct: 274 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPVAPVD 316
>AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat
containing 4 variant protein.
Length = 441
Score = 31.5 bits (68), Expect = 2.4
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +1
Query: 283 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 405
PAA+ G +P PT P G P + G YP +P D
Sbjct: 250 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVD 292
>Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein.
Length = 279
Score = 31.1 bits (67), Expect = 3.2
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +1
Query: 295 SYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTPQNASILS 456
S PG TP+P P T S P TP+ T+I VPTT N++ +S
Sbjct: 130 SGPGTTPSPV-PTTSTTSAPTTSTTSGPGTTPSAVPTTSITSVPTTSTNSAPIS 182
>AK095343-1|BAC04535.1| 1043|Homo sapiens protein ( Homo sapiens
cDNA FLJ38024 fis, clone CTONG2012996, highly similar to
Mus musculus F-box protein FBX18 mRNA. ).
Length = 1043
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = -2
Query: 603 RH-FLFLPTEHMQRNVSRITCLGLDLLGTET*SPKGTTIVTFITSHHCLLAKYRSILRSC 427
RH F FLP E + RN+S + L +++ P ++ + ++K IL +C
Sbjct: 221 RHVFAFLPVEDLYRNLSLVCHLWREIISDPLFIPWKKLYHRYLMNEEQAVSKVDGILSNC 280
Query: 426 --RNPFNCCIIALGWCHIRIALITKCTMWCHMAARCSWCWRD 307
+ C++ L IR TKC+ R W RD
Sbjct: 281 GIEKESDLCVLNL----IRYTATTKCSPSVD-PERVLWSLRD 317
>BC010738-1|AAH10738.2| 490|Homo sapiens TMEM112 protein protein.
Length = 490
Score = 30.3 bits (65), Expect = 5.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 90 YRNRKCLDIHTETQIIPHPKDQFTHRS 170
+R+ C+D H ETQ +P+P + H S
Sbjct: 155 WRDLTCMDFHYETQPMPNPVAYYLHHS 181
>AK025955-1|BAB15295.1| 458|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22302 fis, clone HRC04795. ).
Length = 458
Score = 30.3 bits (65), Expect = 5.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 90 YRNRKCLDIHTETQIIPHPKDQFTHRS 170
+R+ C+D H ETQ +P+P + H S
Sbjct: 123 WRDLTCMDFHYETQPMPNPVAYYLHHS 149
>AK022743-1|BAB14218.1| 567|Homo sapiens protein ( Homo sapiens
cDNA FLJ12681 fis, clone NT2RM4002446. ).
Length = 567
Score = 30.3 bits (65), Expect = 5.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 90 YRNRKCLDIHTETQIIPHPKDQFTHRS 170
+R+ C+D H ETQ +P+P + H S
Sbjct: 232 WRDLTCMDFHYETQPMPNPVAYYLHHS 258
>AE006465-5|AAK61259.1| 567|Homo sapiens possible integral membrane
protein.
Length = 567
Score = 30.3 bits (65), Expect = 5.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 90 YRNRKCLDIHTETQIIPHPKDQFTHRS 170
+R+ C+D H ETQ +P+P + H S
Sbjct: 232 WRDLTCMDFHYETQPMPNPVAYYLHHS 258
>AB075873-1|BAD38655.1| 563|Homo sapiens putative protein product
of HMFN1876 protein.
Length = 563
Score = 30.3 bits (65), Expect = 5.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 90 YRNRKCLDIHTETQIIPHPKDQFTHRS 170
+R+ C+D H ETQ +P+P + H S
Sbjct: 228 WRDLTCMDFHYETQPMPNPVAYYLHHS 254
>BC117255-1|AAI17256.1| 1048|Homo sapiens Sin3A-associated protein,
130kDa protein.
Length = 1048
Score = 29.5 bits (63), Expect = 9.8
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 274 GQQPAAMSYPGITPAPTAPRG--HVTPHGAFGYQSYPYVT 387
G QPA + PGI PAP +G TP G Q P T
Sbjct: 570 GIQPAPIGTPGIQPAPLGTQGIHSATPINTQGLQPAPMGT 609
>BC017453-1|AAH17453.2| 693|Homo sapiens SAP130 protein protein.
Length = 693
Score = 29.5 bits (63), Expect = 9.8
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 274 GQQPAAMSYPGITPAPTAPRG--HVTPHGAFGYQSYPYVT 387
G QPA + PGI PAP +G TP G Q P T
Sbjct: 215 GIQPAPIGTPGIQPAPLGTQGIHSATPINTQGLQPAPMGT 254
>AY220791-1|AAO63591.1| 1048|Homo sapiens SIN3A-associated protein
130 protein.
Length = 1048
Score = 29.5 bits (63), Expect = 9.8
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 274 GQQPAAMSYPGITPAPTAPRG--HVTPHGAFGYQSYPYVT 387
G QPA + PGI PAP +G TP G Q P T
Sbjct: 570 GIQPAPIGTPGIQPAPLGTQGIHSATPINTQGLQPAPMGT 609
>AK055979-1|BAB71063.1| 710|Homo sapiens protein ( Homo sapiens
cDNA FLJ31417 fis, clone NT2NE2000327, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 710
Score = 29.5 bits (63), Expect = 9.8
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 274 GQQPAAMSYPGITPAPTAPRG--HVTPHGAFGYQSYPYVT 387
G QPA + PGI PAP +G TP G Q P T
Sbjct: 543 GIQPAPIGTPGIQPAPLGTQGIHSATPINTQGLQPAPMGT 582
>AK022823-1|BAB14261.1| 613|Homo sapiens protein ( Homo sapiens
cDNA FLJ12761 fis, clone NT2RP2001378, weakly similar to
MUCIN 2 PRECURSOR. ).
Length = 613
Score = 29.5 bits (63), Expect = 9.8
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 274 GQQPAAMSYPGITPAPTAPRG--HVTPHGAFGYQSYPYVT 387
G QPA + PGI PAP +G TP G Q P T
Sbjct: 100 GIQPAPIGTPGIQPAPLGTQGIHSATPINTQGLQPAPMGT 139
>AC012306-2|AAY14878.1| 732|Homo sapiens unknown protein.
Length = 732
Score = 29.5 bits (63), Expect = 9.8
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 274 GQQPAAMSYPGITPAPTAPRG--HVTPHGAFGYQSYPYVT 387
G QPA + PGI PAP +G TP G Q P T
Sbjct: 254 GIQPAPIGTPGIQPAPLGTQGIHSATPINTQGLQPAPMGT 293
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,758,923
Number of Sequences: 237096
Number of extensions: 2396763
Number of successful extensions: 7430
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 6830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7420
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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