Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10682
         (705 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L18972-1|AAC26837.1|  683|Homo sapiens anonymous protein.              74   6e-13
CR456542-1|CAG30428.1|  683|Homo sapiens PK1.3 protein.                74   6e-13
BC003615-1|AAH03615.1|  683|Homo sapiens THO complex 5 protein.        74   6e-13
AB023200-1|BAA76827.2|  687|Homo sapiens KIAA0983 protein protein.     74   6e-13

>L18972-1|AAC26837.1|  683|Homo sapiens anonymous protein.
          Length = 683

 Score = 73.7 bits (173), Expect = 6e-13
 Identities = 39/104 (37%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
 Frame = +2

Query: 200 STNQKETTSQN*KRI*RRQAEAKIKRVFKKHPLNVQVSVKAEDGTALNLILSYLINLKII 379
           S  ++E T++  +     Q + K K + K+HPL+V + +K +D + L+L   YL+NL I+
Sbjct: 314 SDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVLHLTFYYLMNLNIM 373

Query: 380 VVKFTVSLP-KPVTGVSAADVLNGHSILNELYPGDTGDDSPHPA 508
            VK  V+   + +T +SA D+L+  S+L+ LYPGD G  +P+PA
Sbjct: 374 TVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPA 417



 Score = 35.9 bits (79), Expect = 0.14
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +1

Query: 472 PRGYGR*FTPPCTSYLLKNAGISESFSHFIPEIGRPYVWAQRMCGIDFMTSELNEQSV 645
           P  +G+    P   Y     GI  + S ++ E+G PY+W Q++ G+ F   E  +Q+V
Sbjct: 406 PGDHGKKTPNPANQYQFDKVGIL-TLSDYVLELGHPYLWVQKLGGLHF-PKEQPQQTV 461


>CR456542-1|CAG30428.1|  683|Homo sapiens PK1.3 protein.
          Length = 683

 Score = 73.7 bits (173), Expect = 6e-13
 Identities = 39/104 (37%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
 Frame = +2

Query: 200 STNQKETTSQN*KRI*RRQAEAKIKRVFKKHPLNVQVSVKAEDGTALNLILSYLINLKII 379
           S  ++E T++  +     Q + K K + K+HPL+V + +K +D + L+L   YL+NL I+
Sbjct: 314 SDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVLHLTFYYLMNLNIM 373

Query: 380 VVKFTVSLP-KPVTGVSAADVLNGHSILNELYPGDTGDDSPHPA 508
            VK  V+   + +T +SA D+L+  S+L+ LYPGD G  +P+PA
Sbjct: 374 TVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPA 417



 Score = 35.9 bits (79), Expect = 0.14
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +1

Query: 472 PRGYGR*FTPPCTSYLLKNAGISESFSHFIPEIGRPYVWAQRMCGIDFMTSELNEQSV 645
           P  +G+    P   Y     GI  + S ++ E+G PY+W Q++ G+ F   E  +Q+V
Sbjct: 406 PGDHGKKTPNPANQYQFDKVGIL-TLSDYVLELGHPYLWVQKLGGLHF-PKEQPQQTV 461


>BC003615-1|AAH03615.1|  683|Homo sapiens THO complex 5 protein.
          Length = 683

 Score = 73.7 bits (173), Expect = 6e-13
 Identities = 39/104 (37%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
 Frame = +2

Query: 200 STNQKETTSQN*KRI*RRQAEAKIKRVFKKHPLNVQVSVKAEDGTALNLILSYLINLKII 379
           S  ++E T++  +     Q + K K + K+HPL+V + +K +D + L+L   YL+NL I+
Sbjct: 314 SDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVLHLTFYYLMNLNIM 373

Query: 380 VVKFTVSLP-KPVTGVSAADVLNGHSILNELYPGDTGDDSPHPA 508
            VK  V+   + +T +SA D+L+  S+L+ LYPGD G  +P+PA
Sbjct: 374 TVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPA 417



 Score = 35.9 bits (79), Expect = 0.14
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +1

Query: 472 PRGYGR*FTPPCTSYLLKNAGISESFSHFIPEIGRPYVWAQRMCGIDFMTSELNEQSV 645
           P  +G+    P   Y     GI  + S ++ E+G PY+W Q++ G+ F   E  +Q+V
Sbjct: 406 PGDHGKKTPNPANQYQFDKVGIL-TLSDYVLELGHPYLWVQKLGGLHF-PKEQPQQTV 461


>AB023200-1|BAA76827.2|  687|Homo sapiens KIAA0983 protein protein.
          Length = 687

 Score = 73.7 bits (173), Expect = 6e-13
 Identities = 39/104 (37%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
 Frame = +2

Query: 200 STNQKETTSQN*KRI*RRQAEAKIKRVFKKHPLNVQVSVKAEDGTALNLILSYLINLKII 379
           S  ++E T++  +     Q + K K + K+HPL+V + +K +D + L+L   YL+NL I+
Sbjct: 318 SDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVLHLTFYYLMNLNIM 377

Query: 380 VVKFTVSLP-KPVTGVSAADVLNGHSILNELYPGDTGDDSPHPA 508
            VK  V+   + +T +SA D+L+  S+L+ LYPGD G  +P+PA
Sbjct: 378 TVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPA 421



 Score = 35.9 bits (79), Expect = 0.14
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +1

Query: 472 PRGYGR*FTPPCTSYLLKNAGISESFSHFIPEIGRPYVWAQRMCGIDFMTSELNEQSV 645
           P  +G+    P   Y     GI  + S ++ E+G PY+W Q++ G+ F   E  +Q+V
Sbjct: 410 PGDHGKKTPNPANQYQFDKVGIL-TLSDYVLELGHPYLWVQKLGGLHF-PKEQPQQTV 465


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,892,189
Number of Sequences: 237096
Number of extensions: 1603604
Number of successful extensions: 3531
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3527
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)