Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10677
(732 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 132 4e-32
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 91 1e-19
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 87 2e-18
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 87 2e-18
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 83 5e-17
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 79 9e-16
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 78 1e-15
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 78 1e-15
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 77 2e-15
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 77 3e-15
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 77 3e-15
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 75 8e-15
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 73 4e-14
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 69 9e-13
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 63 5e-11
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 57 3e-09
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 54 2e-08
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 54 3e-08
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 41 2e-04
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 38 0.001
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.52
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 29 0.90
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.2
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 27 2.1
SPAC18G6.06 |||U3 snoRNP-associated protein Utp11|Schizosaccharo... 27 2.1
SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa... 27 2.1
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 27 3.6
SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase |Sc... 27 3.6
SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14 |Schizo... 27 3.6
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 26 4.8
SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting endonucl... 26 4.8
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 26 4.8
SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces... 26 4.8
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 6.4
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 26 6.4
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 25 8.4
SPBC1773.07c |sbp1|yrb1|Ran GTPase binding protein Sbp1|Schizosa... 25 8.4
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 132 bits (320), Expect = 4e-32
Identities = 58/84 (69%), Positives = 74/84 (88%)
Frame = +3
Query: 3 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRA 182
V+NQ+LTEMDG+ +KKNVF+IGATNRPD IDPA++RPGRLDQLIY+PLPDE++R +IL+
Sbjct: 619 VVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQT 678
Query: 183 NLRKSPIAKDVDLSYIAKVTQGFS 254
LR +P+A+DVDL +AK T GFS
Sbjct: 679 QLRHTPVAEDVDLRAVAKATHGFS 702
Score = 81.8 bits (193), Expect = 9e-17
Identities = 39/83 (46%), Positives = 55/83 (66%)
Frame = +3
Query: 3 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRA 182
V++Q+LT MDGM A+ NV ++ ATNRP+ IDPA+ R GR D+ + + +PD R ILR
Sbjct: 344 VVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRI 403
Query: 183 NLRKSPIAKDVDLSYIAKVTQGF 251
+ + +A DVDL IA T G+
Sbjct: 404 HTKNMKLADDVDLEQIAAETHGY 426
Score = 76.6 bits (180), Expect = 3e-15
Identities = 41/84 (48%), Positives = 53/84 (63%)
Frame = +2
Query: 257 ADLTEICQRACKLAIRQAIEAEIHRERSRXXXXXXXVMDMDEEDPVPEISRAHFEEAMKF 436
ADL + QRA KLAI+ +IE +I RE V+ MDE+ V ++ R H EEAMK
Sbjct: 704 ADLEFVVQRAVKLAIKDSIEEDIKRENETGEAPADDVV-MDEDASVSQVQRHHVEEAMKM 762
Query: 437 ARRSVSDNDIRKYEMFAQTLQQSR 508
ARRSVSD ++R+YE +A L SR
Sbjct: 763 ARRSVSDAEVRRYEAYAHQLLTSR 786
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 91.5 bits (217), Expect = 1e-19
Identities = 40/84 (47%), Positives = 62/84 (73%)
Frame = +3
Query: 3 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRA 182
V+ +L E+DG+ A +NV ++ ATNRPD+IDPA++RPGRLD+L+Y+ P+ ++R+ I++
Sbjct: 666 VVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKI 725
Query: 183 NLRKSPIAKDVDLSYIAKVTQGFS 254
K A+DVDL IA+ T+G S
Sbjct: 726 QAEKMKFAEDVDLDLIAEKTEGCS 749
Score = 57.2 bits (132), Expect = 2e-09
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +3
Query: 15 ILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRK 194
+LT +DGM V +I ATNRP+ ID A+ RPGRL++ I I +PD+ +R I++ L
Sbjct: 403 LLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSG 462
Query: 195 SP-IAKDVDLSYIAKVTQGF 251
P D L +A T +
Sbjct: 463 VPNEINDAQLEDLASRTHAY 482
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 87.0 bits (206), Expect = 2e-18
Identities = 42/87 (48%), Positives = 59/87 (67%), Gaps = 4/87 (4%)
Frame = +3
Query: 6 INQILTEMDGMGAKKN----VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAI 173
+NQ+L ++DG ++ V IGATN P+ +DPA+ RPGR D+ I++PLPD + R AI
Sbjct: 387 LNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDVRGRLAI 446
Query: 174 LRANLRKSPIAKDVDLSYIAKVTQGFS 254
L + R P+ KDVDLS IA+ T GF+
Sbjct: 447 LLQHTRHVPLGKDVDLSIIARGTSGFA 473
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 87.0 bits (206), Expect = 2e-18
Identities = 36/78 (46%), Positives = 57/78 (73%)
Frame = +3
Query: 3 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRA 182
V+N +LTE+DG+ + V++I ATNRPDIIDPA+LRPGRLD+ + + LPD R IL+
Sbjct: 612 VVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKT 671
Query: 183 NLRKSPIAKDVDLSYIAK 236
+++P+ ++V+L + +
Sbjct: 672 LTKQTPLHEEVNLDVLGR 689
Score = 64.9 bits (151), Expect = 1e-11
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 VINQILTEMDGMGAKKN----VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREA 170
++ Q LT MD + +K V +IGATNRPD +D A+ R GR D+ I + +P + +RE
Sbjct: 294 IVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREK 353
Query: 171 ILRANLRKSPIAKDVDLSYIAKVTQGF 251
ILR + ++ D D +AK T G+
Sbjct: 354 ILRTMAKGLKLSGDFDFRQLAKQTPGY 380
Score = 32.7 bits (71), Expect = 0.056
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = +2
Query: 257 ADLTEICQRACKLAIRQAIEAEIHRERSRXXXXXXXVMDMDEEDPVPEISRAHFEEAMKF 436
ADL + + A A+R A+ A+I + +P+ ++ A FE A K
Sbjct: 699 ADLAALVREAAVTALRSAVFADIASNEPE-------ITQHSALEPI-RVTNADFELAFKN 750
Query: 437 ARRSVSDNDIRKYEMFAQ 490
+ SVSD D +KY+ A+
Sbjct: 751 IKPSVSDRDRQKYQRLAK 768
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 82.6 bits (195), Expect = 5e-17
Identities = 38/84 (45%), Positives = 57/84 (67%)
Frame = +3
Query: 3 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRA 182
V+NQILT+MDG + V+I+ AT RPD+IDPA+LRPGRLD+LI+ LP+E+ R +L+
Sbjct: 726 VVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQK 785
Query: 183 NLRKSPIAKDVDLSYIAKVTQGFS 254
+ I L ++ +T G++
Sbjct: 786 LANRFHIENAAMLKKLSTLTDGYT 809
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 78.6 bits (185), Expect = 9e-16
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 INQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRAN 185
+NQ+L EMDG + +++ + TNRPD++DPA+LRPGR D+ I I PD RE I + +
Sbjct: 420 LNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVH 479
Query: 186 LRKSPIAKDVDL--SYIAKVTQGFS 254
L+ A ++DL +A +T GF+
Sbjct: 480 LKHIKAADNIDLIAKRLAVLTSGFT 504
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 78.2 bits (184), Expect = 1e-15
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Frame = +3
Query: 3 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRA 182
+++ +L MDGM ++ V IIGATNRPD +DPA+ RPGR D+ Y PLPD +R+ I+
Sbjct: 391 IVSTLLALMDGMESRGQVIIIGATNRPDAVDPALRRPGRFDREFYFPLPDRDARKKIIEI 450
Query: 183 NLRK-SPIAKDVDLSYIAKVTQGFSALT*RRYASEPA 290
+ R P + S +A+ ++G+ R +E A
Sbjct: 451 HTRNWDPPVPEWLCSMLAEKSKGYGGADLRALCTEAA 487
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 77.8 bits (183), Expect = 1e-15
Identities = 36/81 (44%), Positives = 59/81 (72%), Gaps = 3/81 (3%)
Frame = +3
Query: 3 VINQILTEMDGMGAKKN--VFIIGATNRPDIIDPAILRPGRLDQLIYIPL-PDEKSREAI 173
V++Q+L E+D + N VF+IGATNRPD++DP++LRPGR D+L+Y+ + E+S+ ++
Sbjct: 776 VVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASM 835
Query: 174 LRANLRKSPIAKDVDLSYIAK 236
LRA + + + +DL+ IAK
Sbjct: 836 LRALTKTFKLDETIDLNEIAK 856
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 77.4 bits (182), Expect = 2e-15
Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
Frame = +3
Query: 3 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRA 182
V+NQ+L +MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LPDE R IL+
Sbjct: 401 VVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKI 460
Query: 183 NLRKSP----IAKDVDLSYIAKVTQGFSALT*RRYASEPASWPFAR 308
+ + + DVD+ +A +T+ FS +S+ F R
Sbjct: 461 HTSRMASNGILENDVDMEELASLTKNFSGAEIAGLIKSASSFAFYR 506
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 77.0 bits (181), Expect = 3e-15
Identities = 39/91 (42%), Positives = 54/91 (59%)
Frame = +3
Query: 12 QILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLR 191
++L +MDG II ATNRPD +DPA+LRPGRLD+ I IPLP+E R IL+ +L
Sbjct: 258 ELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLE 317
Query: 192 KSPIAKDVDLSYIAKVTQGFSALT*RRYASE 284
K ++D + K+T G + R +E
Sbjct: 318 KVSKQGEIDYEALVKLTDGTNGADLRNVVTE 348
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 76.6 bits (180), Expect = 3e-15
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 12 QILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLR 191
++L ++DG A KN+ +I ATNR DI+DPA+LRPGR+D+ I P P ++R ILR + R
Sbjct: 272 ELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSR 331
Query: 192 KSPIAKDVDLSYIAKVTQGFS 254
+ + +DL IA+ G S
Sbjct: 332 SMNLTRGIDLKSIAEKMNGAS 352
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 75.4 bits (177), Expect = 8e-15
Identities = 37/97 (38%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +3
Query: 3 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRA 182
+++ +L MDG+ + V +IGATNRP+ +DPA+ RPGR D+ Y PLP++++R IL
Sbjct: 497 IVSTLLALMDGLDTRGQVVVIGATNRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEI 556
Query: 183 N-LRKSPIAKDVDLSYIAKVTQGFSALT*RRYASEPA 290
N L SP + L ++A+ T G+ + +E A
Sbjct: 557 NSLHFSPKIPESYLLHLAESTSGYGGADLKALCTEAA 593
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 72.9 bits (171), Expect = 4e-14
Identities = 33/81 (40%), Positives = 53/81 (65%)
Frame = +3
Query: 12 QILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLR 191
++L ++DG + V +I ATNR D +DPA+LR GRLD+ + PLP+E++R ILR + R
Sbjct: 311 ELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSR 370
Query: 192 KSPIAKDVDLSYIAKVTQGFS 254
K I D++ +A+ T ++
Sbjct: 371 KMAIDDDINWEELARSTDEYN 391
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 68.5 bits (160), Expect = 9e-13
Identities = 35/104 (33%), Positives = 60/104 (57%)
Frame = +3
Query: 12 QILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLR 191
+++T++DG + N+ ++ ATNRP+ +D A++RPGR+D+ + LPD + R ILR + +
Sbjct: 305 ELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAK 364
Query: 192 KSPIAKDVDLSYIAKVTQGFSALT*RRYASEPASWPFARPSRRR 323
I KD+ IA++ + R +E FA +RRR
Sbjct: 365 SMAIDKDIRWELIARLCPSQTGAELRSVCTEAGM--FAIRARRR 406
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 62.9 bits (146), Expect = 5e-11
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 3 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIP-LPDEKSREAILR 179
++ ++LT+MDG NV +I ATNR D +DPA+LRPGRLD+ I P D + R + +
Sbjct: 257 ILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQ 316
Query: 180 ANLRKSPIAKDVDL 221
K ++ +VDL
Sbjct: 317 TITAKMLLSPEVDL 330
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 56.8 bits (131), Expect = 3e-09
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Frame = +3
Query: 12 QILTEMDGMG-AKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANL 188
++L ++DG +++++ +I ATNR +DPA++RPGR+D+ I PDE ++ I +
Sbjct: 317 ELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHT 376
Query: 189 RKSPIAKDVDLSYIAKVTQGFSALT*RRYASE 284
K + +DV+L + + S + SE
Sbjct: 377 SKMNLGEDVNLEELIQCKDDLSGAEIKAIVSE 408
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 54.0 bits (124), Expect = 2e-08
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = +3
Query: 12 QILTEMDGMGAKKN-VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANL 188
+ L +M+G+G ++ V ++GATN P +D AI R R ++ IYIPLP+ +R + N+
Sbjct: 251 EFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELNV 308
Query: 189 RKSPI-AKDVDLSYIAKVTQGFS 254
K P D +AK+T G+S
Sbjct: 309 GKIPSELTSQDFKELAKMTDGYS 331
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 53.6 bits (123), Expect = 3e-08
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 QILTEMDGM-GAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANL 188
+ ++ DG+ + V ++GATNRP ID AI R R+ ++ IPLP+ + R IL L
Sbjct: 214 EFMSMWDGLLSGQSRVLVLGATNRPADIDEAIRR--RMPKVFSIPLPNAEQRRKILELYL 271
Query: 189 RKSPIAKDVDLSYIAKVTQGFS 254
+K P+ + D + + T G S
Sbjct: 272 KKVPLEANFDWNGVVNATAGLS 293
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 40.7 bits (91), Expect = 2e-04
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 15 ILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI-PLPDEKSREAILRANLR 191
+L +DG+ + I TN P+ +DPA++RPGR+D Y+ E+ RE R
Sbjct: 327 LLNALDGVTSSDERIIFMTTNHPEKLDPALVRPGRVDVKAYLGNATPEQVREMFTRFYGH 386
Query: 192 KSPIAKDV 215
+A D+
Sbjct: 387 SPEMADDL 394
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 37.9 bits (84), Expect = 0.001
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +3
Query: 54 VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDV-DLSYI 230
V ++ ATN P ID A R R + YIPLPDE +R L L+ + + D+ I
Sbjct: 606 VLVLAATNLPWCIDDAARR--RFVRRTYIPLPDETTRRLHLNNLLKYQKHSLSLEDIEAI 663
Query: 231 AKVTQGFSALT*RRYASEPASWP 299
K T+ +S A + A P
Sbjct: 664 VKATEYYSGSDLTALAKDAAMGP 686
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.5 bits (63), Expect = 0.52
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +2
Query: 455 DNDIRKYEMFAQTLQ---QSRASEPTSDSQQTR-ELQGARVLQRATSPRSRRRGVTTTCT 622
D+ + K +M + ++ Q S D + R +L+ A LQ+ PR+RR+G T +
Sbjct: 1377 DDVVDKAKMILEKMEGHSQLLTSSANPDEEVLRAKLKAAERLQKPAIPRTRRKGHTEPKS 1436
Query: 623 AKLCLA 640
AK LA
Sbjct: 1437 AKSLLA 1442
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 28.7 bits (61), Expect = 0.90
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 392 VPEISRAHFEEAMKFARRSVSDNDIRKYE 478
+P IS HF+ +++ R SVS I +YE
Sbjct: 622 IPPISLNHFKASLRTIRPSVSQEGIHRYE 650
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 95 PGHPASRPSGPAHLHPAAGREVPRGHPARQP 187
P P+ PS P L P+A +P G PA P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 419 EEAMKFARRSVSDNDIRKYEMFAQTLQQSRASEPT 523
EEA+ F+ +SD D ++E F ++ A EPT
Sbjct: 48 EEALDFSEDELSDLDENQFENFDESKIGREAEEPT 82
>SPAC18G6.06 |||U3 snoRNP-associated protein
Utp11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 27.5 bits (58), Expect = 2.1
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +2
Query: 413 HFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRASEPTSDSQQTRELQG 556
H E+ M + N+ RK+ +F ++++++ P Q T +L G
Sbjct: 116 HLEQQMHTVGAHRNKNESRKHTIFVDNVKEAKSFNPAEFFQTTDDLVG 163
>SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 639
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = +2
Query: 23 RDGRHGRQEERLH--HRCHKQTGHHRPGHPASRPSGPAHLHPAAGRE 157
R+ H R+ H HR K H R P+SR +G H +E
Sbjct: 20 RETNHSRRHRHHHSRHRESKHGRHDRSERPSSREAGDRSRHERFSKE 66
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 194 FAKVGAQDGLAGLLVRQRDVD-ELVQTAGTQDGRVDDVRSVCG 69
FA + L+ ++++DVD EL++ G G VDD + V G
Sbjct: 187 FANIAVDAVLSVADLQRKDVDFELIKVDGKVGGSVDDTKLVKG 229
>SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 123 DQLIYIPLPDEKSREAILRANLRK-SPIAKDVDLSYI 230
D L+ + L D+K REA LR+ K K+ LSY+
Sbjct: 303 DNLVVVNLLDQKGREAPLRSGFEKLCKRNKNPPLSYV 339
>SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 566
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +2
Query: 407 RAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRASEPTSDSQQTRELQG 556
R HF+++ KFA + ++ + A S A E ++ + R++ G
Sbjct: 48 RLHFKDSRKFAFSRKKEKELTSEDSDAANQSPSGAPESQTEEESDRKIDG 97
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 1 ASSTRSSPRWTAWAPRRTSSSSVPQTDRTSSTRPS 105
+SS+ SS ++ + +SSSSVP T TSS+ S
Sbjct: 186 SSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSS 220
>SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting
endonuclease Cce1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 258
Score = 26.2 bits (55), Expect = 4.8
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 290 CRLAGISPSGQRTEALRHLGD 228
C+L G+S SG++ E LR + D
Sbjct: 13 CKLTGLSRSGRKDELLRRIVD 33
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 26.2 bits (55), Expect = 4.8
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 365 VMDMDEEDPVPEISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRASEPTSDSQQT 541
++D D D + + + K R+ DN + YE LQQS A +P+ D+ T
Sbjct: 186 ILDEDNHDLLENVEMV--QRKTKNERKE--DNPYKPYEDENDFLQQSEADQPSEDTFTT 240
>SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 26.2 bits (55), Expect = 4.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 545 ELQGARVLQRATSPRSRRRGVTTTCTAKLCLARDL 649
ELQ V + SPR R GVT TA++ R +
Sbjct: 60 ELQQKNVPPSSRSPRRRVAGVTNNVTARISSKRKI 94
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/45 (24%), Positives = 16/45 (35%)
Frame = +2
Query: 5 HQPDPHRDGRHGRQEERLHHRCHKQTGHHRPGHPASRPSGPAHLH 139
H P H +++ HH+ K HH+ GP H
Sbjct: 382 HHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHQGPKEKH 426
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 25.8 bits (54), Expect = 6.4
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -3
Query: 421 LEVSAANLRNGVFLVHVHNGSGGLLLATPLAMDLRLDGLANGQLAGSLAYL 269
L+ + N+RN L HV +G LA L L +G+ + +LAG++ +L
Sbjct: 12 LQKNQENIRNFTLLAHVDHGK--TTLADSL---LASNGIISSKLAGTVRFL 57
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 25.4 bits (53), Expect = 8.4
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -3
Query: 391 GVFLVHVHNGSGGLLLATPLAMDLRLDGLANGQLAGSLAYLRQVSALKPCV 239
GV + + NGS +L +T A+ + G+A G+L GS ++ + A C+
Sbjct: 153 GVTFLALGNGSPDIL-STFAAVRVNSGGMAIGELLGSAFFIVAIVAGSVCL 202
>SPBC1773.07c |sbp1|yrb1|Ran GTPase binding protein
Sbp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 215
Score = 25.4 bits (53), Expect = 8.4
Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 3/119 (2%)
Frame = +2
Query: 380 EEDPVPEISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRASEPTSDSQQTRELQGA 559
+ED P HFE +K + N+ + F + R + S+ ++ R A
Sbjct: 63 DEDAEPASPEVHFEPIVKLSAVETKTNEEEETVEFKMRAKLFRFDKAASEWKE-RGTGDA 121
Query: 560 RVLQRATSPRSR---RRGVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRPTTPT 727
R+L+ + ++R RR T A L ++ +P R+ V +V PT
Sbjct: 122 RLLKHKETGKTRLVMRRDKTLKVCANHLLMPEMKLTPNVGSDRSWVWTVAADVSEGEPT 180
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,877,415
Number of Sequences: 5004
Number of extensions: 55723
Number of successful extensions: 238
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 345237368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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