Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10675
         (712 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC132675-1|AAI32676.1|  574|Homo sapiens ZNF382 protein protein.       33   1.3  
BC022898-1|AAH22898.1|  195|Homo sapiens COMM domain containing ...    30   9.4  
AY542159-1|AAS22241.1|  195|Homo sapiens COMMD3 protein.               30   9.4  
AL158211-3|CAI15951.1|  195|Homo sapiens COMM domain containing ...    30   9.4  
AF201948-1|AAF17240.1|  195|Homo sapiens PIL protein protein.          30   9.4  

>BC132675-1|AAI32676.1|  574|Homo sapiens ZNF382 protein protein.
          Length = 574

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 565 PSYKYKIEKTTFDLKNLFNGNKELADTTLQFANENWQQL 681
           P  + K E ++ +LK +  G+    D T+ F  E WQQL
Sbjct: 10  PKEELKRESSSRNLKAMSQGSVSFKDVTVDFTQEEWQQL 48


>BC022898-1|AAH22898.1|  195|Homo sapiens COMM domain containing 3
           protein.
          Length = 195

 Score = 29.9 bits (64), Expect = 9.4
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +3

Query: 102 ADDAYLPPYIEACEFSNENLEQ-CIKEQIEKSLPEFTKGIPELDVPSTDPVHW 257
           AD + L  Y+E C+F  E +E  C + Q  K+  E   G     +P    V W
Sbjct: 78  ADKSTLSTYLEDCKFDRERIELFCTEYQNNKNSLEILLGSIGRSLPHITDVSW 130


>AY542159-1|AAS22241.1|  195|Homo sapiens COMMD3 protein.
          Length = 195

 Score = 29.9 bits (64), Expect = 9.4
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +3

Query: 102 ADDAYLPPYIEACEFSNENLEQ-CIKEQIEKSLPEFTKGIPELDVPSTDPVHW 257
           AD + L  Y+E C+F  E +E  C + Q  K+  E   G     +P    V W
Sbjct: 78  ADKSTLSTYLEDCKFDRERIELFCTEYQNNKNSLEILLGSIGRSLPHITDVSW 130


>AL158211-3|CAI15951.1|  195|Homo sapiens COMM domain containing 3
           protein.
          Length = 195

 Score = 29.9 bits (64), Expect = 9.4
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +3

Query: 102 ADDAYLPPYIEACEFSNENLEQ-CIKEQIEKSLPEFTKGIPELDVPSTDPVHW 257
           AD + L  Y+E C+F  E +E  C + Q  K+  E   G     +P    V W
Sbjct: 78  ADKSTLSTYLEDCKFDRERIELFCTEYQNNKNSLEILLGSIGRSLPHITDVSW 130


>AF201948-1|AAF17240.1|  195|Homo sapiens PIL protein protein.
          Length = 195

 Score = 29.9 bits (64), Expect = 9.4
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +3

Query: 102 ADDAYLPPYIEACEFSNENLEQ-CIKEQIEKSLPEFTKGIPELDVPSTDPVHW 257
           AD + L  Y+E C+F  E +E  C + Q  K+  E   G     +P    V W
Sbjct: 78  ADKSTLSTYLEDCKFDRERIELFCTEYQNNKNSLEILLGSIGRSLPHITDVSW 130


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,654,670
Number of Sequences: 237096
Number of extensions: 2014149
Number of successful extensions: 8609
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8609
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)