Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10674
         (424 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   1.2  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   3.7  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   3.7  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   3.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   3.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   4.9  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   6.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   6.5  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     20   8.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    20   8.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           20   8.6  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 276 GRGGPVHRHQDAEASVR 326
           G GGP+H H+ A A  R
Sbjct: 298 GAGGPLHDHRPALAQQR 314


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 287 TGSSAPRCRSICS 325
           TG S P CR  CS
Sbjct: 46  TGLSLPACRLFCS 58


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 326 LENVGSARRTGDSASADSVLYQYIYLY 406
           LEN+   R    S    +VL+Q I++Y
Sbjct: 90  LENLKLDRENNSSFVVANVLFQLIHVY 116


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 326 LENVGSARRTGDSASADSVLYQYIYLY 406
           LEN+   R    S    +VL+Q I++Y
Sbjct: 90  LENLKLDRENNSSFVVANVLFQLIHVY 116


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 326 LENVGSARRTGDSASADSVLYQYIYLY 406
           LEN+   R    S    +VL+Q I++Y
Sbjct: 410 LENLKLDRENNSSFVVANVLFQLIHVY 436


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 303 QDAEASVRWKTWGRQDGPEIVH 368
           + AEA+   K  GR + P+I H
Sbjct: 397 ESAEATAELKLGGRFEPPQIRH 418


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = +3

Query: 198 PTPSCA*K*RGWPTRPSPRDQEDGPQ 275
           P+ S A    GW   P P D    P+
Sbjct: 56  PSTSAAADVDGWQVTPLPSDGTTSPE 81


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 251 WRWPRGPSSLLSRA 210
           W  P GP +L SRA
Sbjct: 92  WPQPTGPVTLASRA 105


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 255 DQEDGPQGRGGPVHRHQD 308
           +Q+DG  G+G   +  +D
Sbjct: 182 EQDDGDDGQGSSTNNDED 199


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 255 DQEDGPQGRGGPVHRHQD 308
           +Q+DG  G+G   +  +D
Sbjct: 182 EQDDGDDGQGSSTNNDED 199


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 255 DQEDGPQGRGGPVHRHQD 308
           +Q+DG  G+G   +  +D
Sbjct: 182 EQDDGDDGQGSSTNNDED 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,940
Number of Sequences: 336
Number of extensions: 1546
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9384961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)