Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10674
         (424 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029268-1|ABK30905.1|  461|Drosophila melanogaster IP07471p pro...    66   2e-11
AF181654-1|AAD55439.1|  652|Drosophila melanogaster BcDNA.LD2383...    66   2e-11
AE013599-854|AAF58945.1|  652|Drosophila melanogaster CG8801-PA ...    66   2e-11
Z98254-1|CAB10913.1|  723|Drosophila melanogaster EG:114E2.1 pro...    30   1.5  
AY051955-1|AAK93379.1|  723|Drosophila melanogaster LD42380p pro...    30   1.5  
AF079556-1|AAC28734.1|  768|Drosophila melanogaster poly(ADP-rib...    30   1.5  
AE014298-545|AAF45886.1|  768|Drosophila melanogaster CG2864-PA ...    30   1.5  
AY089471-1|AAL90209.1|  335|Drosophila melanogaster AT28327p pro...    29   1.9  
AE014297-1448|AAN13540.2|  357|Drosophila melanogaster CG14736-P...    29   1.9  
AE014297-1447|AAN13539.1|  477|Drosophila melanogaster CG14736-P...    29   1.9  
AE014297-1446|AAF54746.2|  495|Drosophila melanogaster CG14736-P...    29   1.9  
M25545-4|AAA28621.1|  361|Drosophila melanogaster protein ( D.me...    28   5.9  
M25545-3|AAA28624.1|  365|Drosophila melanogaster protein ( D.me...    28   5.9  
M25545-2|AAA28623.1|  360|Drosophila melanogaster protein ( D.me...    28   5.9  
M25545-1|AAA28622.1|  364|Drosophila melanogaster protein ( D.me...    28   5.9  
M15766-1|AAA70426.1|  365|Drosophila melanogaster unknown protei...    28   5.9  
AY061448-1|AAL28996.1|  361|Drosophila melanogaster LD38464p pro...    28   5.9  
AE014297-4248|AAN14144.1|  361|Drosophila melanogaster CG9983-PF...    28   5.9  
AE014297-4247|AAN14143.1|  361|Drosophila melanogaster CG9983-PD...    28   5.9  
AE014297-4246|AAN14142.1|  365|Drosophila melanogaster CG9983-PC...    28   5.9  
AE014297-4245|AAF56801.1|  365|Drosophila melanogaster CG9983-PB...    28   5.9  
AE014297-4244|AAN14141.1|  360|Drosophila melanogaster CG9983-PE...    28   5.9  
AE014297-4243|AAF56800.2|  364|Drosophila melanogaster CG9983-PA...    28   5.9  
BT001326-1|AAN71081.1|  687|Drosophila melanogaster AT17065p pro...    27   7.8  
AE014297-1810|AAN13597.1|  861|Drosophila melanogaster CG31327-P...    27   7.8  

>BT029268-1|ABK30905.1|  461|Drosophila melanogaster IP07471p
           protein.
          Length = 461

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +1

Query: 268 GLKGEADRFIGTKMPKHLFAGKRGVGKTDRR 360
           GLKGEADRFIGTKMPKHLF+GKRG GKTDRR
Sbjct: 431 GLKGEADRFIGTKMPKHLFSGKRGNGKTDRR 461



 Score = 39.9 bits (89), Expect = 0.001
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = +1

Query: 1   VMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAHFT 114
           V+PR  + K + RS  KL   ME LGVDMS + +A+FT
Sbjct: 319 VIPRNKQPKVRDRSVQKLVSTMEGLGVDMSGSENANFT 356


>AF181654-1|AAD55439.1|  652|Drosophila melanogaster BcDNA.LD23830
           protein.
          Length = 652

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +1

Query: 268 GLKGEADRFIGTKMPKHLFAGKRGVGKTDRR 360
           GLKGEADRFIGTKMPKHLF+GKRG GKTDRR
Sbjct: 622 GLKGEADRFIGTKMPKHLFSGKRGNGKTDRR 652



 Score = 39.9 bits (89), Expect = 0.001
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = +1

Query: 1   VMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAHFT 114
           V+PR  + K + RS  KL   ME LGVDMS + +A+FT
Sbjct: 510 VIPRNKQPKVRDRSVQKLVSTMEGLGVDMSGSENANFT 547


>AE013599-854|AAF58945.1|  652|Drosophila melanogaster CG8801-PA
           protein.
          Length = 652

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +1

Query: 268 GLKGEADRFIGTKMPKHLFAGKRGVGKTDRR 360
           GLKGEADRFIGTKMPKHLF+GKRG GKTDRR
Sbjct: 622 GLKGEADRFIGTKMPKHLFSGKRGNGKTDRR 652



 Score = 39.9 bits (89), Expect = 0.001
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = +1

Query: 1   VMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAHFT 114
           V+PR  + K + RS  KL   ME LGVDMS + +A+FT
Sbjct: 510 VIPRNKQPKVRDRSVQKLVSTMEGLGVDMSGSENANFT 547


>Z98254-1|CAB10913.1|  723|Drosophila melanogaster EG:114E2.1
           protein.
          Length = 723

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = -3

Query: 386 KXHCPLMHYLRSVLPTPRFPANRCFGILVPMNRSASPLRPIFLVSWRWPRGP 231
           K  C +MHY R V PT R  +N   G++  + RS  P     L+ W     P
Sbjct: 250 KLKC-IMHYFRRVCPTERDASNVPTGVVTFVRRSGLPEH---LIDWSQSAAP 297


>AY051955-1|AAK93379.1|  723|Drosophila melanogaster LD42380p
           protein.
          Length = 723

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = -3

Query: 386 KXHCPLMHYLRSVLPTPRFPANRCFGILVPMNRSASPLRPIFLVSWRWPRGP 231
           K  C +MHY R V PT R  +N   G++  + RS  P     L+ W     P
Sbjct: 250 KLKC-IMHYFRRVCPTERDASNVPTGVVTFVRRSGLPEH---LIDWSQSAAP 297


>AF079556-1|AAC28734.1|  768|Drosophila melanogaster
           poly(ADP-ribose) glycohydrolase protein.
          Length = 768

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = -3

Query: 386 KXHCPLMHYLRSVLPTPRFPANRCFGILVPMNRSASPLRPIFLVSWRWPRGP 231
           K  C +MHY R V PT R  +N   G++  + RS  P     L+ W     P
Sbjct: 295 KLKC-IMHYFRRVCPTERDASNVPTGVVTFVRRSGLPEH---LIDWSQSAAP 342


>AE014298-545|AAF45886.1|  768|Drosophila melanogaster CG2864-PA
           protein.
          Length = 768

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = -3

Query: 386 KXHCPLMHYLRSVLPTPRFPANRCFGILVPMNRSASPLRPIFLVSWRWPRGP 231
           K  C +MHY R V PT R  +N   G++  + RS  P     L+ W     P
Sbjct: 295 KLKC-IMHYFRRVCPTERDASNVPTGVVTFVRRSGLPEH---LIDWSQSAAP 342


>AY089471-1|AAL90209.1|  335|Drosophila melanogaster AT28327p
           protein.
          Length = 335

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
 Frame = +1

Query: 193 GGRPHHARESKEDGPRGHRQETKKMGLKGEADRFIGTK----MPKHLFAGKRGVGKTDR 357
           GG     +E+K++   G  +ET+K G  G +D F G      + K +FAGK    +T R
Sbjct: 196 GGGGGGGKETKKEDVAGGSKETRKEG--GGSDSFSGGSSGGLLSKFIFAGKEEKNQTTR 252


>AE014297-1448|AAN13540.2|  357|Drosophila melanogaster CG14736-PC,
           isoform C protein.
          Length = 357

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
 Frame = +1

Query: 193 GGRPHHARESKEDGPRGHRQETKKMGLKGEADRFIGTK----MPKHLFAGKRGVGKTDR 357
           GG     +E+K++   G  +ET+K G  G +D F G      + K +FAGK    +T R
Sbjct: 196 GGGGGGGKETKKEDVAGGSKETRKEG--GGSDSFSGGSSGGLLSKFIFAGKEEKNQTTR 252


>AE014297-1447|AAN13539.1|  477|Drosophila melanogaster CG14736-PA,
           isoform A protein.
          Length = 477

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
 Frame = +1

Query: 193 GGRPHHARESKEDGPRGHRQETKKMGLKGEADRFIGTK----MPKHLFAGKRGVGKTDR 357
           GG     +E+K++   G  +ET+K G  G +D F G      + K +FAGK    +T R
Sbjct: 316 GGGGGGGKETKKEDVAGGSKETRKEG--GGSDSFSGGSSGGLLSKFIFAGKEEKNQTTR 372


>AE014297-1446|AAF54746.2|  495|Drosophila melanogaster CG14736-PB,
           isoform B protein.
          Length = 495

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
 Frame = +1

Query: 193 GGRPHHARESKEDGPRGHRQETKKMGLKGEADRFIGTK----MPKHLFAGKRGVGKTDR 357
           GG     +E+K++   G  +ET+K G  G +D F G      + K +FAGK    +T R
Sbjct: 316 GGGGGGGKETKKEDVAGGSKETRKEG--GGSDSFSGGSSGGLLSKFIFAGKEEKNQTTR 372


>M25545-4|AAA28621.1|  361|Drosophila melanogaster protein (
           D.melanogaster Hrb98DElocus encoding heterogeneous
           nuclear ribonucleoproteinisoforms, exon 5. ).
          Length = 361

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 243 PSPRDQEDGPQGRGGPVHRHQDAEASVRWKTWGRQDG 353
           P   DQ+ G  GRGGP  R      ++    +G Q+G
Sbjct: 195 PKQNDQQGGGGGRGGPGGRAGGNRGNMGGGNYGNQNG 231


>M25545-3|AAA28624.1|  365|Drosophila melanogaster protein (
           D.melanogaster Hrb98DElocus encoding heterogeneous
           nuclear ribonucleoproteinisoforms, exon 5. ).
          Length = 365

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 243 PSPRDQEDGPQGRGGPVHRHQDAEASVRWKTWGRQDG 353
           P   DQ+ G  GRGGP  R      ++    +G Q+G
Sbjct: 199 PKQNDQQGGGGGRGGPGGRAGGNRGNMGGGNYGNQNG 235


>M25545-2|AAA28623.1|  360|Drosophila melanogaster protein (
           D.melanogaster Hrb98DElocus encoding heterogeneous
           nuclear ribonucleoproteinisoforms, exon 5. ).
          Length = 360

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 243 PSPRDQEDGPQGRGGPVHRHQDAEASVRWKTWGRQDG 353
           P   DQ+ G  GRGGP  R      ++    +G Q+G
Sbjct: 194 PKQNDQQGGGGGRGGPGGRAGGNRGNMGGGNYGNQNG 230


>M25545-1|AAA28622.1|  364|Drosophila melanogaster protein (
           D.melanogaster Hrb98DElocus encoding heterogeneous
           nuclear ribonucleoproteinisoforms, exon 5. ).
          Length = 364

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 243 PSPRDQEDGPQGRGGPVHRHQDAEASVRWKTWGRQDG 353
           P   DQ+ G  GRGGP  R      ++    +G Q+G
Sbjct: 198 PKQNDQQGGGGGRGGPGGRAGGNRGNMGGGNYGNQNG 234


>M15766-1|AAA70426.1|  365|Drosophila melanogaster unknown protein
           protein.
          Length = 365

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 243 PSPRDQEDGPQGRGGPVHRHQDAEASVRWKTWGRQDG 353
           P   DQ+ G  GRGGP  R      ++    +G Q+G
Sbjct: 199 PKQNDQQGGGGGRGGPGGRAGGNRGNMGGGNYGNQNG 235


>AY061448-1|AAL28996.1|  361|Drosophila melanogaster LD38464p
           protein.
          Length = 361

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 243 PSPRDQEDGPQGRGGPVHRHQDAEASVRWKTWGRQDG 353
           P   DQ+ G  GRGGP  R      ++    +G Q+G
Sbjct: 195 PKQNDQQGGGGGRGGPGGRAGGNRGNMGGGNYGNQNG 231


>AE014297-4248|AAN14144.1|  361|Drosophila melanogaster CG9983-PF,
           isoform F protein.
          Length = 361

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 243 PSPRDQEDGPQGRGGPVHRHQDAEASVRWKTWGRQDG 353
           P   DQ+ G  GRGGP  R      ++    +G Q+G
Sbjct: 195 PKQNDQQGGGGGRGGPGGRAGGNRGNMGGGNYGNQNG 231


>AE014297-4247|AAN14143.1|  361|Drosophila melanogaster CG9983-PD,
           isoform D protein.
          Length = 361

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 243 PSPRDQEDGPQGRGGPVHRHQDAEASVRWKTWGRQDG 353
           P   DQ+ G  GRGGP  R      ++    +G Q+G
Sbjct: 195 PKQNDQQGGGGGRGGPGGRAGGNRGNMGGGNYGNQNG 231


>AE014297-4246|AAN14142.1|  365|Drosophila melanogaster CG9983-PC,
           isoform C protein.
          Length = 365

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 243 PSPRDQEDGPQGRGGPVHRHQDAEASVRWKTWGRQDG 353
           P   DQ+ G  GRGGP  R      ++    +G Q+G
Sbjct: 199 PKQNDQQGGGGGRGGPGGRAGGNRGNMGGGNYGNQNG 235


>AE014297-4245|AAF56801.1|  365|Drosophila melanogaster CG9983-PB,
           isoform B protein.
          Length = 365

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 243 PSPRDQEDGPQGRGGPVHRHQDAEASVRWKTWGRQDG 353
           P   DQ+ G  GRGGP  R      ++    +G Q+G
Sbjct: 199 PKQNDQQGGGGGRGGPGGRAGGNRGNMGGGNYGNQNG 235


>AE014297-4244|AAN14141.1|  360|Drosophila melanogaster CG9983-PE,
           isoform E protein.
          Length = 360

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 243 PSPRDQEDGPQGRGGPVHRHQDAEASVRWKTWGRQDG 353
           P   DQ+ G  GRGGP  R      ++    +G Q+G
Sbjct: 194 PKQNDQQGGGGGRGGPGGRAGGNRGNMGGGNYGNQNG 230


>AE014297-4243|AAF56800.2|  364|Drosophila melanogaster CG9983-PA,
           isoform A protein.
          Length = 364

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 243 PSPRDQEDGPQGRGGPVHRHQDAEASVRWKTWGRQDG 353
           P   DQ+ G  GRGGP  R      ++    +G Q+G
Sbjct: 198 PKQNDQQGGGGGRGGPGGRAGGNRGNMGGGNYGNQNG 234


>BT001326-1|AAN71081.1|  687|Drosophila melanogaster AT17065p
           protein.
          Length = 687

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +2

Query: 176 EPSNQPVADPIMRVKVKRMAHAAIAKRPRRWASRERRTGSSAPRCRSICSLE 331
           EP   P   PI+  K  ++   +   +P + +S E  +    P CR  CS E
Sbjct: 200 EPKENPCQVPIIHTKPLKIKKKSGLGKPLQISS-ESESDEECPPCRCTCSAE 250


>AE014297-1810|AAN13597.1|  861|Drosophila melanogaster CG31327-PA
           protein.
          Length = 861

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +2

Query: 176 EPSNQPVADPIMRVKVKRMAHAAIAKRPRRWASRERRTGSSAPRCRSICSLE 331
           EP   P   PI+  K  ++   +   +P + +S E  +    P CR  CS E
Sbjct: 374 EPKENPCQVPIIHTKPLKIKKKSGLGKPLQISS-ESESDEECPPCRCTCSAE 424


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,401,989
Number of Sequences: 53049
Number of extensions: 326284
Number of successful extensions: 1232
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1292733852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)