Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10674
         (424 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF036706-9|AAK39281.1|  681|Caenorhabditis elegans Hypothetical ...    48   2e-06
AF036706-10|AAM97948.1|  633|Caenorhabditis elegans Hypothetical...    47   6e-06
AF036706-11|AAO91698.1|   53|Caenorhabditis elegans Hypothetical...    33   0.064
U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defe...    29   1.0  
U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defe...    29   1.0  
AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-ty...    29   1.0  
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr...    27   4.2  
U39851-8|AAF99879.1|  937|Caenorhabditis elegans Hypothetical pr...    27   4.2  
Z70207-1|CAA94128.1|  291|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z29443-11|CAK55173.1|  367|Caenorhabditis elegans Hypothetical p...    27   5.5  
Z81466-6|CAB03870.1|  545|Caenorhabditis elegans Hypothetical pr...    26   9.7  
Z75536-5|CAA99833.1|  545|Caenorhabditis elegans Hypothetical pr...    26   9.7  

>AF036706-9|AAK39281.1|  681|Caenorhabditis elegans Hypothetical
           protein T07A9.9a protein.
          Length = 681

 Score = 48.4 bits (110), Expect = 2e-06
 Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
 Frame = +1

Query: 10  RTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAHFTXXXXXXXXXXXXXXXXXXXXXTLQP 189
           R   ++ + RS S+L  ++ +LGVD+      +                        ++P
Sbjct: 560 RIHGSRKRDRSMSRLENELGELGVDVDTKKMKNLQGQCAKPQLGKKMKVGRSRSLSAVRP 619

Query: 190 AGGRPHHARESKEDGPRGHRQETKKM-GL-----KGEADRFIGTKMPKHLFAGKRGVGKT 351
           A  R   A   +E      +  TK M GL     KGEADR +    PKHLF GKRG GKT
Sbjct: 620 AP-RDELAFPDEEKRAHVDKLRTKAMRGLRREAKKGEADRHVYDLKPKHLFCGKRGNGKT 678

Query: 352 DRR 360
           D R
Sbjct: 679 DWR 681


>AF036706-10|AAM97948.1|  633|Caenorhabditis elegans Hypothetical
           protein T07A9.9b protein.
          Length = 633

 Score = 46.8 bits (106), Expect = 6e-06
 Identities = 21/33 (63%), Positives = 24/33 (72%)
 Frame = +1

Query: 262 KMGLKGEADRFIGTKMPKHLFAGKRGVGKTDRR 360
           ++G KGEADR +    PKHLF GKRG GKTD R
Sbjct: 601 QLGKKGEADRHVYDLKPKHLFCGKRGNGKTDWR 633


>AF036706-11|AAO91698.1|   53|Caenorhabditis elegans Hypothetical
           protein T07A9.9c protein.
          Length = 53

 Score = 33.5 bits (73), Expect = 0.064
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = +1

Query: 310 PKHLFAGKRGVGKTDRR 360
           PKHLF GKRG GKTD R
Sbjct: 37  PKHLFCGKRGNGKTDWR 53


>U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying
           defective protein 19,isoform a protein.
          Length = 1783

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +2

Query: 176 EPSNQPVADPIMRVKVKRMAHAAIAK-RPRRWASRERRTGSSAPRCRSIC 322
           E  ++PVA  ++  +        +   RP +WA+R +R      RCR  C
Sbjct: 417 EQEDEPVAQTVVGEEADEEGEERVEDVRPSKWAARMKRLEKLNRRCRRAC 466


>U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying
           defective protein 19,isoform b protein.
          Length = 1877

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +2

Query: 176 EPSNQPVADPIMRVKVKRMAHAAIAK-RPRRWASRERRTGSSAPRCRSIC 322
           E  ++PVA  ++  +        +   RP +WA+R +R      RCR  C
Sbjct: 417 EQEDEPVAQTVVGEEADEEGEERVEDVRPSKWAARMKRLEKLNRRCRRAC 466


>AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-type
           calcium channelalpha 1 subunit protein.
          Length = 1783

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +2

Query: 176 EPSNQPVADPIMRVKVKRMAHAAIAK-RPRRWASRERRTGSSAPRCRSIC 322
           E  ++PVA  ++  +        +   RP +WA+R +R      RCR  C
Sbjct: 417 EQEDEPVAQTVVGEEADEEGEERVEDVRPSKWAARMKRLEKLNRRCRRAC 466


>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
           protein K08E7.5a protein.
          Length = 1221

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +3

Query: 237 TRPSPRDQEDGPQ 275
           T+P PRD EDGPQ
Sbjct: 397 TQPRPRDYEDGPQ 409


>U39851-8|AAF99879.1|  937|Caenorhabditis elegans Hypothetical
           protein C23G10.8 protein.
          Length = 937

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -3

Query: 359 LRSVLPTPRFPANRCFGILVPMNRSASPLRPIFLVS 252
           L S  PT  F  +  F IL P N +A  + P+FL++
Sbjct: 637 LGSNSPTENFMTSEYFDILQPWNYTALWINPLFLLA 672


>Z70207-1|CAA94128.1|  291|Caenorhabditis elegans Hypothetical
           protein F15A2.1 protein.
          Length = 291

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3

Query: 228 GWPTRPSPRDQEDGPQGRGGPVHRHQDA 311
           G P RP P     GP+G+ GPV  H  A
Sbjct: 176 GQPGRPGPAGPA-GPEGKDGPVGPHGPA 202


>Z29443-11|CAK55173.1|  367|Caenorhabditis elegans Hypothetical
           protein T07C4.11 protein.
          Length = 367

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 361 ISGPSCRPHVFQRTDASASWC 299
           IS PSC PH+      S ++C
Sbjct: 328 ISSPSCHPHILSICSCSTTFC 348


>Z81466-6|CAB03870.1|  545|Caenorhabditis elegans Hypothetical
           protein F18C12.3 protein.
          Length = 545

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 250 QETKKMGLKGEADRFIGTKMPKHLFAGKRGVGKTDR 357
           +E K   + GEA R +  K PK +    R   KTD+
Sbjct: 65  EEFKNSEVTGEASREVSVKTPKKVTKRVRKSSKTDK 100


>Z75536-5|CAA99833.1|  545|Caenorhabditis elegans Hypothetical
           protein F18C12.3 protein.
          Length = 545

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 250 QETKKMGLKGEADRFIGTKMPKHLFAGKRGVGKTDR 357
           +E K   + GEA R +  K PK +    R   KTD+
Sbjct: 65  EEFKNSEVTGEASREVSVKTPKKVTKRVRKSSKTDK 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,037,352
Number of Sequences: 27780
Number of extensions: 151362
Number of successful extensions: 425
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 425
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)