Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10673
         (712 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2SMZ7 Cluster: Putative uncharacterized protein; n=1; ...    35   1.7  
UniRef50_A4RJI9 Cluster: Predicted protein; n=1; Magnaporthe gri...    34   3.0  
UniRef50_Q13797 Cluster: Integrin alpha-9 precursor; n=30; Deute...    34   3.0  
UniRef50_UPI0000F1DAC2 Cluster: PREDICTED: hypothetical protein,...    33   5.2  
UniRef50_Q11089 Cluster: Uncharacterized protein C01C4.2; n=1; C...    33   5.2  
UniRef50_O94546 Cluster: Meiotically up-regulated gene 150 prote...    33   5.2  
UniRef50_UPI0000DB6DCA Cluster: PREDICTED: similar to CG17761-PA...    33   6.9  
UniRef50_Q2QPW5 Cluster: Transposon protein, putative, CACTA, En...    33   6.9  
UniRef50_UPI00015A6833 Cluster: hypothetical protein LOC572435; ...    33   9.2  

>UniRef50_A2SMZ7 Cluster: Putative uncharacterized protein; n=1;
           Methylibium petroleiphilum PM1|Rep: Putative
           uncharacterized protein - Methylibium petroleiphilum
           (strain PM1)
          Length = 335

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +1

Query: 523 ILSAEVQRKKNIGPETHETAKLKPSSEDILESLFWNIHGGHFY 651
           I SA V R +  GP T E +     + D+L++ FW   GG+ Y
Sbjct: 147 IQSARVSRARRNGPITIEVSASMDEARDLLDTAFWKAAGGNAY 189


>UniRef50_A4RJI9 Cluster: Predicted protein; n=1; Magnaporthe
           grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
           blast fungus) (Pyricularia grisea)
          Length = 218

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +3

Query: 228 NVGYQPHGNDCEMQEVAIEKNVNTLVTTARKRSADNSGYP-QSKRFREEVMVPTTTNSNP 404
           N+   P   D +  +  +E +++    T+  +  D  G P +S R   E + PTT  SNP
Sbjct: 27  NIEESPGKQDADAVQPTVEYDLDGNTVTSLHQEIDTCGSPTRSSRESSEKVQPTTPESNP 86

Query: 405 C 407
           C
Sbjct: 87  C 87


>UniRef50_Q13797 Cluster: Integrin alpha-9 precursor; n=30;
           Deuterostomia|Rep: Integrin alpha-9 precursor - Homo
           sapiens (Human)
          Length = 1035

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +1

Query: 139 APICGDANQPGQCDNVHISTNFYYGFHEVETSGINH--MATIVRCRKSQLKR 288
           AP C D  QP  C NV    +F +G H  E  G+N+  MA + +  K Q+ R
Sbjct: 479 APQCHDGQQPVNCLNVTTCFSF-HGKHVPEEIGLNYVLMADVAKKEKGQMPR 529


>UniRef50_UPI0000F1DAC2 Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Danio rerio|Rep: PREDICTED: hypothetical
           protein, partial - Danio rerio
          Length = 413

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 103 QGARYNFDAVRPAPICGDANQPGQCDNVHISTN 201
           Q   YN+ A+ PAP+   A  P  C N+ +ST+
Sbjct: 68  QQQHYNYQAILPAPLKRVAESPNSCPNITLSTS 100


>UniRef50_Q11089 Cluster: Uncharacterized protein C01C4.2; n=1;
           Caenorhabditis elegans|Rep: Uncharacterized protein
           C01C4.2 - Caenorhabditis elegans
          Length = 244

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
 Frame = +3

Query: 198 KFLLWIS*SRNVGYQPHGNDCEMQEVAIEKNVNTLVTTARKRSADNSGYPQSKRFREEVM 377
           K   ++   R + ++ + N C    +A     + L    R   ++N+GY +  +F E   
Sbjct: 31  KLCAYVGAYRKISFEVNRNLCRSLGLAEANYADALTNRFRVSYSNNTGYVEMSKFIEYRT 90

Query: 378 VPTTTN-----SNPCLLRPTHNNPD 437
           +P+T N     S P +  PT+ +P+
Sbjct: 91  LPSTPNTIRSPSTPPIFYPTYPSPN 115


>UniRef50_O94546 Cluster: Meiotically up-regulated gene 150 protein;
           n=1; Schizosaccharomyces pombe|Rep: Meiotically
           up-regulated gene 150 protein - Schizosaccharomyces
           pombe (Fission yeast)
          Length = 104

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 20/81 (24%), Positives = 37/81 (45%)
 Frame = -2

Query: 267 ASHNRCHVVDTRRFYFMKSIVKICGYVYIVALTWLVGVTAXXXXXXXXXXXXSTLKPRFN 88
           AS ++ +    +  +F+K+I+ +  Y+Y++   W+V  T                 P F 
Sbjct: 16  ASSDKPNNCSRKNMFFLKNIIVLSNYLYLLYKAWIVCTTISLCCDFPLFNFLFIAIPYFT 75

Query: 87  GIGWHCMSYLVFMNY*KLCFI 25
            I ++  S L F+ +  LCFI
Sbjct: 76  EILYNDSSLLWFL-FVSLCFI 95


>UniRef50_UPI0000DB6DCA Cluster: PREDICTED: similar to CG17761-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG17761-PA - Apis mellifera
          Length = 143

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 294 NTLVTTARKRSADNSGYPQSKRFREEVMVPTTTNSNPCLLRPTHNNP 434
           ++L+ T  K ++D  G   S     + +VP   N+ P  L PTH+ P
Sbjct: 61  DSLIGTVVKLNSDGYGSHTSPAHARQPLVPQNANNPPLCLTPTHSGP 107


>UniRef50_Q2QPW5 Cluster: Transposon protein, putative, CACTA,
           En/Spm sub-class; n=2; Oryza sativa|Rep: Transposon
           protein, putative, CACTA, En/Spm sub-class - Oryza
           sativa subsp. japonica (Rice)
          Length = 855

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 15/57 (26%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
 Frame = -3

Query: 395 VGGCWHHNLFSKTLALWIAAVISTSFSSCG-YKGVHVLFNCDFLHLTIVAMWLIPDV 228
           +G C   +  S T++   +   S++ SS G +KG++ L+  D L ++I++ W++ ++
Sbjct: 435 LGSCTDSSSCSSTVSTLGSCTDSSASSSSGTFKGIYELYQLDALDVSIMSCWILMEI 491


>UniRef50_UPI00015A6833 Cluster: hypothetical protein LOC572435;
           n=2; Danio rerio|Rep: hypothetical protein LOC572435 -
           Danio rerio
          Length = 1641

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
 Frame = +1

Query: 307 PQLEKEVLITAAIHRASVFE-KRLWCQQPPTPTPVCFVQHTTIQIYLVVSWSI*YNIFGL 483
           PQ +++  +TA   +ASV E ++   ++ PTP PVC V+ TT+Q+   VS +    +   
Sbjct: 488 PQ-DQQSCLTAV--KASVEETEKEKAEEAPTPAPVCLVEETTMQV--TVSLAASPIVLKK 542

Query: 484 MKQVQTKTKLDISILSAEVQRKKNIGPETHETAKLKPSSE 603
            K+++   K D+  +  +  ++  + P   E  K  P  E
Sbjct: 543 KKKIKDLNKKDVGDV-LDAFKENLVYPFQPEEEKPAPEPE 581


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,055,664
Number of Sequences: 1657284
Number of extensions: 16112818
Number of successful extensions: 43098
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 41543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43088
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)