Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10672
         (793 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    25   0.92 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   6.5  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   6.5  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 533 DYGGRCHRCFIVDHESTVRVL 471
           DY   CH CF++D + +  +L
Sbjct: 270 DYNRLCHLCFLLDEKLSYIIL 290


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +3

Query: 633  WTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPS 749
            W+S ++   W  T    +  +R   +S   RPT  ++P+
Sbjct: 1043 WSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPT 1081



 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 672  PVSTSHWSRTRQSSLPRRPT 731
            P +T+HW     +S   RPT
Sbjct: 1177 PSTTNHWQTKTTTSTTTRPT 1196


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/28 (28%), Positives = 11/28 (39%)
 Frame = -1

Query: 268 WSASFGFCPKPNLRFPFQWCSDHGHSCW 185
           W AS  FC      F +    +  + CW
Sbjct: 164 WVASLAFCIPQLTIFTYTSVGEDEYDCW 191


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 77  RGTCLPAPVSLKKVLKES 24
           RGTC P    LKK L ++
Sbjct: 53  RGTCSPDGEELKKALPDA 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,223
Number of Sequences: 336
Number of extensions: 3957
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)