Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10672
(793 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 176 2e-44
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 176 2e-44
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 176 2e-44
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 176 2e-44
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 164 7e-41
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 164 7e-41
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 153 2e-37
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 92 4e-19
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 91 1e-18
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 90 1e-18
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 90 1e-18
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 89 3e-18
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 89 3e-18
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 88 5e-18
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 87 1e-17
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 87 1e-17
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 55 5e-08
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 55 6e-08
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 36 0.041
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 176 bits (428), Expect = 2e-44
Identities = 79/85 (92%), Positives = 84/85 (98%)
Frame = +1
Query: 1 DKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED 180
DKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKED
Sbjct: 39 DKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKED 98
Query: 181 AANNYARGHYTIGKEIVDLVLDRIR 255
AANN+ARGHYTIGKEIVDL LDRIR
Sbjct: 99 AANNFARGHYTIGKEIVDLCLDRIR 123
Score = 161 bits (391), Expect = 5e-40
Identities = 74/91 (81%), Positives = 84/91 (92%)
Frame = +2
Query: 506 SIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 685
+IYDICRR+L+IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF
Sbjct: 208 AIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHF 267
Query: 686 PLVTYAPVISAEKAYHEQLSVAEITKHASSP 778
L +YAPVISAEKA+HEQLSVAEIT A P
Sbjct: 268 MLSSYAPVISAEKAFHEQLSVAEITNSAFEP 298
Score = 120 bits (290), Expect = 8e-28
Identities = 54/85 (63%), Positives = 67/85 (78%)
Frame = +3
Query: 255 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVE 434
KLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVE
Sbjct: 124 KLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVE 183
Query: 435 PYNSILTTHTTLEHSDCAFMVDNEA 509
PYNS+L+TH+ LEH+D + ++DNEA
Sbjct: 184 PYNSVLSTHSLLEHTDVSILLDNEA 208
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 176 bits (428), Expect = 2e-44
Identities = 79/85 (92%), Positives = 84/85 (98%)
Frame = +1
Query: 1 DKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED 180
DKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKED
Sbjct: 39 DKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKED 98
Query: 181 AANNYARGHYTIGKEIVDLVLDRIR 255
AANN+ARGHYTIGKEIVDL LDRIR
Sbjct: 99 AANNFARGHYTIGKEIVDLCLDRIR 123
Score = 161 bits (391), Expect = 5e-40
Identities = 74/91 (81%), Positives = 84/91 (92%)
Frame = +2
Query: 506 SIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 685
+IYDICRR+L+IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF
Sbjct: 208 AIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHF 267
Query: 686 PLVTYAPVISAEKAYHEQLSVAEITKHASSP 778
L +YAPVISAEKA+HEQLSVAEIT A P
Sbjct: 268 MLSSYAPVISAEKAFHEQLSVAEITNSAFEP 298
Score = 120 bits (290), Expect = 8e-28
Identities = 54/85 (63%), Positives = 67/85 (78%)
Frame = +3
Query: 255 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVE 434
KLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVE
Sbjct: 124 KLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVE 183
Query: 435 PYNSILTTHTTLEHSDCAFMVDNEA 509
PYNS+L+TH+ LEH+D + ++DNEA
Sbjct: 184 PYNSVLSTHSLLEHTDVSILLDNEA 208
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 176 bits (428), Expect = 2e-44
Identities = 79/85 (92%), Positives = 84/85 (98%)
Frame = +1
Query: 1 DKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED 180
DKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKED
Sbjct: 39 DKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKED 98
Query: 181 AANNYARGHYTIGKEIVDLVLDRIR 255
AANN+ARGHYTIGKEIVDL LDRIR
Sbjct: 99 AANNFARGHYTIGKEIVDLCLDRIR 123
Score = 161 bits (390), Expect = 6e-40
Identities = 74/91 (81%), Positives = 83/91 (91%)
Frame = +2
Query: 506 SIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 685
+IYDICRR+L IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF
Sbjct: 208 AIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHF 267
Query: 686 PLVTYAPVISAEKAYHEQLSVAEITKHASSP 778
L +YAPVISAEKA+HEQLSVAEIT A P
Sbjct: 268 MLSSYAPVISAEKAFHEQLSVAEITNSAFEP 298
Score = 120 bits (290), Expect = 8e-28
Identities = 54/85 (63%), Positives = 67/85 (78%)
Frame = +3
Query: 255 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVE 434
KLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVE
Sbjct: 124 KLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVE 183
Query: 435 PYNSILTTHTTLEHSDCAFMVDNEA 509
PYNS+L+TH+ LEH+D + ++DNEA
Sbjct: 184 PYNSVLSTHSLLEHTDVSILLDNEA 208
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 176 bits (428), Expect = 2e-44
Identities = 79/85 (92%), Positives = 84/85 (98%)
Frame = +1
Query: 1 DKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED 180
DKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKED
Sbjct: 39 DKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKED 98
Query: 181 AANNYARGHYTIGKEIVDLVLDRIR 255
AANN+ARGHYTIGKEIVDL LDRIR
Sbjct: 99 AANNFARGHYTIGKEIVDLCLDRIR 123
Score = 161 bits (390), Expect = 6e-40
Identities = 74/91 (81%), Positives = 83/91 (91%)
Frame = +2
Query: 506 SIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 685
+IYDICRR+L IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF
Sbjct: 208 AIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHF 267
Query: 686 PLVTYAPVISAEKAYHEQLSVAEITKHASSP 778
L +YAPVISAEKA+HEQLSVAEIT A P
Sbjct: 268 MLSSYAPVISAEKAFHEQLSVAEITNSAFEP 298
Score = 120 bits (290), Expect = 8e-28
Identities = 54/85 (63%), Positives = 67/85 (78%)
Frame = +3
Query: 255 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVE 434
KLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVE
Sbjct: 124 KLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVE 183
Query: 435 PYNSILTTHTTLEHSDCAFMVDNEA 509
PYNS+L+TH+ LEH+D + ++DNEA
Sbjct: 184 PYNSVLSTHSLLEHTDVSILLDNEA 208
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 164 bits (398), Expect = 7e-41
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1
Query: 1 DKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED 180
D T+G D+FNTFFSETGAGKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKED
Sbjct: 39 DTTVGVAHDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKED 98
Query: 181 AANNYARGHYTIGKEIVDLVLDRIR 255
AANN+ARGHYT+GKEIVDL LDR+R
Sbjct: 99 AANNFARGHYTVGKEIVDLCLDRVR 123
Score = 157 bits (381), Expect = 8e-39
Identities = 73/91 (80%), Positives = 80/91 (87%)
Frame = +2
Query: 506 SIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 685
+IYDICRR+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF
Sbjct: 208 AIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHF 267
Query: 686 PLVTYAPVISAEKAYHEQLSVAEITKHASSP 778
L +YAPVISA KAYHEQLSV EIT P
Sbjct: 268 MLSSYAPVISAAKAYHEQLSVPEITNAVFEP 298
Score = 123 bits (296), Expect = 2e-28
Identities = 57/85 (67%), Positives = 67/85 (78%)
Frame = +3
Query: 255 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVE 434
KLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP+PQVSTAVVE
Sbjct: 124 KLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVE 183
Query: 435 PYNSILTTHTTLEHSDCAFMVDNEA 509
PYNS+L+TH+ LEH+D A ++DNEA
Sbjct: 184 PYNSVLSTHSLLEHTDVAVLLDNEA 208
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 164 bits (398), Expect = 7e-41
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1
Query: 1 DKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED 180
D T+G D+FNTFFSETGAGKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKED
Sbjct: 39 DTTVGVAHDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKED 98
Query: 181 AANNYARGHYTIGKEIVDLVLDRIR 255
AANN+ARGHYT+GKEIVDL LDR+R
Sbjct: 99 AANNFARGHYTVGKEIVDLCLDRVR 123
Score = 157 bits (381), Expect = 8e-39
Identities = 73/91 (80%), Positives = 80/91 (87%)
Frame = +2
Query: 506 SIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 685
+IYDICRR+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF
Sbjct: 208 AIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHF 267
Query: 686 PLVTYAPVISAEKAYHEQLSVAEITKHASSP 778
L +YAPVISA KAYHEQLSV EIT P
Sbjct: 268 MLSSYAPVISAAKAYHEQLSVPEITNAVFEP 298
Score = 123 bits (296), Expect = 2e-28
Identities = 57/85 (67%), Positives = 67/85 (78%)
Frame = +3
Query: 255 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVE 434
KLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP+PQVSTAVVE
Sbjct: 124 KLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVE 183
Query: 435 PYNSILTTHTTLEHSDCAFMVDNEA 509
PYNS+L+TH+ LEH+D A ++DNEA
Sbjct: 184 PYNSVLSTHSLLEHTDVAVLLDNEA 208
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 153 bits (370), Expect = 2e-37
Identities = 66/85 (77%), Positives = 78/85 (91%)
Frame = +1
Query: 1 DKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED 180
D T+G D+FNTFFSET +G+HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKED
Sbjct: 39 DSTVGACHDAFNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKED 98
Query: 181 AANNYARGHYTIGKEIVDLVLDRIR 255
AANN+ARGHYT+G+EIVD L+R+R
Sbjct: 99 AANNFARGHYTVGREIVDTCLERLR 123
Score = 151 bits (365), Expect = 7e-37
Identities = 69/91 (75%), Positives = 78/91 (85%)
Frame = +2
Query: 506 SIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 685
+IYDICRR+LDIERPTY+NLNRLI Q +SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF
Sbjct: 208 AIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVPYPRIHF 267
Query: 686 PLVTYAPVISAEKAYHEQLSVAEITKHASSP 778
L +YAPVIS+ KAYHEQ SV EIT P
Sbjct: 268 MLSSYAPVISSAKAYHEQFSVPEITTSVFEP 298
Score = 120 bits (288), Expect = 1e-27
Identities = 55/85 (64%), Positives = 66/85 (77%)
Frame = +3
Query: 255 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVE 434
KLAD CTGLQGFL+F+ LL+ERLSVD+GKKSKL F IYP+PQVSTAVVE
Sbjct: 124 KLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVE 183
Query: 435 PYNSILTTHTTLEHSDCAFMVDNEA 509
PYNS+L+TH+ LEH+D ++DNEA
Sbjct: 184 PYNSVLSTHSLLEHTDVVVLLDNEA 208
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 91.9 bits (218), Expect = 4e-19
Identities = 36/74 (48%), Positives = 53/74 (71%)
Frame = +1
Query: 34 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 213
N +++E G++VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT
Sbjct: 48 NVYYNEASCGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYT 107
Query: 214 IGKEIVDLVLDRIR 255
G E++D VLD +R
Sbjct: 108 EGAELIDAVLDVVR 121
Score = 82.2 bits (194), Expect = 4e-16
Identities = 36/86 (41%), Positives = 55/86 (63%)
Frame = +2
Query: 506 SIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 685
++YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF
Sbjct: 206 ALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHF 265
Query: 686 PLVTYAPVISAEKAYHEQLSVAEITK 763
+V +AP+ S + L+V E+T+
Sbjct: 266 FMVGFAPLTSRGSQQYRALTVPELTQ 291
Score = 68.9 bits (161), Expect = 4e-12
Identities = 31/85 (36%), Positives = 50/85 (58%)
Frame = +3
Query: 255 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVE 434
K A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS VVE
Sbjct: 122 KEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVE 181
Query: 435 PYNSILTTHTTLEHSDCAFMVDNEA 509
PYN+ L+ H +E++D ++DNEA
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEA 206
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 90.6 bits (215), Expect = 1e-18
Identities = 35/77 (45%), Positives = 54/77 (70%)
Frame = +1
Query: 25 DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 204
+ N +++E G++VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+G
Sbjct: 46 ERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKG 105
Query: 205 HYTIGKEIVDLVLDRIR 255
HYT G E++D VLD +R
Sbjct: 106 HYTEGAELIDAVLDVVR 122
Score = 83.8 bits (198), Expect = 1e-16
Identities = 37/86 (43%), Positives = 56/86 (65%)
Frame = +2
Query: 506 SIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 685
++YDIC R L + P++ +LN LI +S +T SLRF G LN DL + NL+P+PR+HF
Sbjct: 207 ALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHF 266
Query: 686 PLVTYAPVISAEKAYHEQLSVAEITK 763
+V +AP+ S + L+V E+T+
Sbjct: 267 FMVGFAPLTSRGSQQYISLTVPELTQ 292
Score = 68.9 bits (161), Expect = 4e-12
Identities = 31/85 (36%), Positives = 50/85 (58%)
Frame = +3
Query: 255 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVE 434
K A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS VVE
Sbjct: 123 KEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVE 182
Query: 435 PYNSILTTHTTLEHSDCAFMVDNEA 509
PYN+ L+ H +E++D ++DNEA
Sbjct: 183 PYNATLSVHQLVENADECMVLDNEA 207
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 90.2 bits (214), Expect = 1e-18
Identities = 36/77 (46%), Positives = 54/77 (70%)
Frame = +1
Query: 25 DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 204
+ N +F+E GK+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+G
Sbjct: 45 ERINVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKG 104
Query: 205 HYTIGKEIVDLVLDRIR 255
HYT G E++D VLD +R
Sbjct: 105 HYTEGAELIDSVLDVVR 121
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/86 (44%), Positives = 55/86 (63%)
Frame = +2
Query: 506 SIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 685
++YDIC R L + PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF
Sbjct: 206 ALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHF 265
Query: 686 PLVTYAPVISAEKAYHEQLSVAEITK 763
+V +AP+ S + LSV E+T+
Sbjct: 266 FMVGFAPLTSRGSQQYSALSVPELTQ 291
Score = 68.1 bits (159), Expect = 6e-12
Identities = 30/85 (35%), Positives = 50/85 (58%)
Frame = +3
Query: 255 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVE 434
K A+ C LQGF + H LL+ ++ +Y + + F+++P+P+VS VVE
Sbjct: 122 KEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVE 181
Query: 435 PYNSILTTHTTLEHSDCAFMVDNEA 509
PYN+ L+ H +E++D ++DNEA
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEA 206
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 90.2 bits (214), Expect = 1e-18
Identities = 36/74 (48%), Positives = 53/74 (71%)
Frame = +1
Query: 34 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 213
N +++E G++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT
Sbjct: 48 NVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYT 107
Query: 214 IGKEIVDLVLDRIR 255
G E++D VLD +R
Sbjct: 108 EGAELIDSVLDVVR 121
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/86 (41%), Positives = 55/86 (63%)
Frame = +2
Query: 506 SIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 685
++YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF
Sbjct: 206 ALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHF 265
Query: 686 PLVTYAPVISAEKAYHEQLSVAEITK 763
+V +AP+ S + L+V E+T+
Sbjct: 266 FMVGFAPLTSRGSQQYRNLTVPELTQ 291
Score = 68.1 bits (159), Expect = 6e-12
Identities = 30/85 (35%), Positives = 50/85 (58%)
Frame = +3
Query: 255 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVE 434
K A+ C LQGF + H LL+ ++ +Y + + F+++P+P+VS VVE
Sbjct: 122 KEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVE 181
Query: 435 PYNSILTTHTTLEHSDCAFMVDNEA 509
PYN+ L+ H +E++D ++DNEA
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEA 206
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 89.0 bits (211), Expect = 3e-18
Identities = 36/74 (48%), Positives = 52/74 (70%)
Frame = +1
Query: 34 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 213
N +++E G+ VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT
Sbjct: 48 NVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYT 107
Query: 214 IGKEIVDLVLDRIR 255
G E++D VLD +R
Sbjct: 108 EGAELIDSVLDVVR 121
Score = 82.2 bits (194), Expect = 4e-16
Identities = 36/86 (41%), Positives = 55/86 (63%)
Frame = +2
Query: 506 SIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 685
++YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF
Sbjct: 206 ALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHF 265
Query: 686 PLVTYAPVISAEKAYHEQLSVAEITK 763
+V +AP+ S + L+V E+T+
Sbjct: 266 FMVGFAPLTSRGSQQYRALTVPELTQ 291
Score = 68.9 bits (161), Expect = 4e-12
Identities = 31/85 (36%), Positives = 50/85 (58%)
Frame = +3
Query: 255 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVE 434
K A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS VVE
Sbjct: 122 KEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVE 181
Query: 435 PYNSILTTHTTLEHSDCAFMVDNEA 509
PYN+ L+ H +E++D ++DNEA
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEA 206
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 89.0 bits (211), Expect = 3e-18
Identities = 34/77 (44%), Positives = 54/77 (70%)
Frame = +1
Query: 25 DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 204
+ N +++E G++VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+G
Sbjct: 46 ERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKG 105
Query: 205 HYTIGKEIVDLVLDRIR 255
HYT G E++D VLD +R
Sbjct: 106 HYTEGAELIDAVLDVVR 122
Score = 83.8 bits (198), Expect = 1e-16
Identities = 37/86 (43%), Positives = 56/86 (65%)
Frame = +2
Query: 506 SIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 685
++YDIC R L + P++ +LN LI +S +T SLRF G LN DL + NL+P+PR+HF
Sbjct: 207 ALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHF 266
Query: 686 PLVTYAPVISAEKAYHEQLSVAEITK 763
+V +AP+ S + L+V E+T+
Sbjct: 267 FMVGFAPLTSRGSQQYISLTVPELTQ 292
Score = 68.9 bits (161), Expect = 4e-12
Identities = 31/85 (36%), Positives = 50/85 (58%)
Frame = +3
Query: 255 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVE 434
K A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS VVE
Sbjct: 123 KEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVE 182
Query: 435 PYNSILTTHTTLEHSDCAFMVDNEA 509
PYN+ L+ H +E++D ++DNEA
Sbjct: 183 PYNATLSVHQLVENADECMVLDNEA 207
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 88.2 bits (209), Expect = 5e-18
Identities = 35/77 (45%), Positives = 54/77 (70%)
Frame = +1
Query: 25 DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 204
+ + +F+E GK+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+G
Sbjct: 45 ERIDVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKG 104
Query: 205 HYTIGKEIVDLVLDRIR 255
HYT G E++D VLD +R
Sbjct: 105 HYTEGAELIDSVLDVVR 121
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/86 (44%), Positives = 55/86 (63%)
Frame = +2
Query: 506 SIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 685
++YDIC R L + PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF
Sbjct: 206 ALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHF 265
Query: 686 PLVTYAPVISAEKAYHEQLSVAEITK 763
+V +AP+ S + LSV E+T+
Sbjct: 266 FMVGFAPLTSRGSQQYSALSVPELTQ 291
Score = 64.1 bits (149), Expect = 1e-10
Identities = 29/85 (34%), Positives = 49/85 (57%)
Frame = +3
Query: 255 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVE 434
K A+ LQGF + H LL+ ++ +Y + + F+++P+P+VS VVE
Sbjct: 122 KEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVE 181
Query: 435 PYNSILTTHTTLEHSDCAFMVDNEA 509
PYN+ L+ H +E++D ++DNEA
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEA 206
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 87.0 bits (206), Expect = 1e-17
Identities = 35/77 (45%), Positives = 52/77 (67%)
Frame = +1
Query: 25 DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 204
+ N +++E G+ VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+G
Sbjct: 45 ERINVYYNEASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKG 104
Query: 205 HYTIGKEIVDLVLDRIR 255
HYT G E++D VLD +R
Sbjct: 105 HYTEGAELIDSVLDVVR 121
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/86 (41%), Positives = 55/86 (63%)
Frame = +2
Query: 506 SIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 685
++YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF
Sbjct: 206 ALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHF 265
Query: 686 PLVTYAPVISAEKAYHEQLSVAEITK 763
+V +AP+ S + L+V E+T+
Sbjct: 266 FMVGFAPLTSRGSQQYRSLTVPELTQ 291
Score = 68.9 bits (161), Expect = 4e-12
Identities = 31/85 (36%), Positives = 50/85 (58%)
Frame = +3
Query: 255 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVE 434
K A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS VVE
Sbjct: 122 KEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVE 181
Query: 435 PYNSILTTHTTLEHSDCAFMVDNEA 509
PYN+ L+ H +E++D ++DNEA
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEA 206
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 87.0 bits (206), Expect = 1e-17
Identities = 35/77 (45%), Positives = 52/77 (67%)
Frame = +1
Query: 25 DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 204
+ N +++E G+ VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+G
Sbjct: 45 ERINVYYNEASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKG 104
Query: 205 HYTIGKEIVDLVLDRIR 255
HYT G E++D VLD +R
Sbjct: 105 HYTEGAELIDSVLDVVR 121
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/86 (41%), Positives = 55/86 (63%)
Frame = +2
Query: 506 SIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 685
++YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF
Sbjct: 206 ALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHF 265
Query: 686 PLVTYAPVISAEKAYHEQLSVAEITK 763
+V +AP+ S + L+V E+T+
Sbjct: 266 FMVGFAPLTSRGSQQYRSLTVPELTQ 291
Score = 68.9 bits (161), Expect = 4e-12
Identities = 31/85 (36%), Positives = 50/85 (58%)
Frame = +3
Query: 255 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVE 434
K A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS VVE
Sbjct: 122 KEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVE 181
Query: 435 PYNSILTTHTTLEHSDCAFMVDNEA 509
PYN+ L+ H +E++D ++DNEA
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEA 206
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = +1
Query: 19 GDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANN 192
G D + FF + ++PRA+ +DLEP V++ ++ G YR L++ E + A NN
Sbjct: 44 GGDRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNN 103
Query: 193 YARGHYTIGKEIVDLVLDRI 252
+A G++ GK + + ++D I
Sbjct: 104 WASGYHQ-GKGVEEEIMDMI 122
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +2
Query: 518 ICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVT 697
I L + PT+ N L+ ++S+ T +LR+ G +N DL +L+P PR HF +
Sbjct: 213 IAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 272
Query: 698 YAPVISAEKA 727
Y P+ +A
Sbjct: 273 YTPLTVERQA 282
Score = 52.0 bits (119), Expect = 4e-07
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +3
Query: 210 HHWKGNRRFGFGQNPKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLE 389
H KG + AD L+GF++ H L+E L+ Y KK
Sbjct: 109 HQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQT 168
Query: 390 FAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEA 509
++++P + S VV+PYNS+LT ++DC ++DN A
Sbjct: 169 YSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTA 209
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 54.8 bits (126), Expect = 6e-08
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = +1
Query: 19 GDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANN 192
G D + FF + ++PRA+ +DLEP V++ ++ G YR L++ E + A NN
Sbjct: 44 GGDRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNN 103
Query: 193 YARGHYTIGKEIVDLVLDRI 252
+A G++ GK + + ++D I
Sbjct: 104 WASGYHQ-GKGVEEEIMDMI 122
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +2
Query: 518 ICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVT 697
I L + PT+ N L+ ++S+ T +LR+ G +N DL +L+P PR HF +
Sbjct: 213 IAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 272
Query: 698 YAPVISAEKA 727
Y P+ +A
Sbjct: 273 YTPLTVERQA 282
Score = 52.0 bits (119), Expect = 4e-07
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +3
Query: 210 HHWKGNRRFGFGQNPKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLE 389
H KG + AD L+GF++ H L+E L+ Y KK
Sbjct: 109 HQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQT 168
Query: 390 FAIYP-APQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEA 509
++++P + S VV+PYNS+LT ++DC ++DN A
Sbjct: 169 YSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTA 209
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 35.5 bits (78), Expect = 0.041
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +1
Query: 592 LDHCFFEIRRRSECGPHRVPD*LGALPPYPLPTGHVRASHLCREG 726
L C RRR GP RV + L PP P+ + V + L REG
Sbjct: 97 LQRCIIARRRRDRVGPVRVENTLPPYPPPPMTSAAVTTTTLAREG 141
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,782,140
Number of Sequences: 28952
Number of extensions: 381331
Number of successful extensions: 1233
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1785055200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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