Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10667X
         (326 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    26   0.12 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   1.9  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   2.5  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   4.3  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   4.3  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   4.3  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   4.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   5.7  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 25.8 bits (54), Expect = 0.12
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 53  TSTLPLTDNPSTSPTSLTRTVTNPREAIXPP 145
           T T   T  PST PT+    VT P +A  PP
Sbjct: 172 TLTTKFTTKPSTKPTNKPVVVTKPPQA--PP 200


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +1

Query: 46   GAYKYTSPDGQPIDLAYVADENGYQPQGSHLPTPHPIPEA 165
            G  KYT+   +   LAY +  +G +    H  T   +PEA
Sbjct: 1166 GLKKYTNYSMEV--LAYTSGGDGVRTTPIHCQTEQDVPEA 1203



 Score = 20.6 bits (41), Expect = 4.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 126  GKPSXHPSPNSRGDRP 173
            G PS   +P +RG++P
Sbjct: 1476 GDPSDTLNPRTRGEKP 1491


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 12/45 (26%), Positives = 16/45 (35%)
 Frame = +1

Query: 85  DLAYVADENGYQPQGSHLPTPHPIPEAIARALPYIDAHPPSPSVV 219
           D+A V    G  P    +P P       + A  Y  +  P P  V
Sbjct: 183 DIALVLPTQGASPLPLLVPIPQRTASTASSASNYSPSQSPEPESV 227



 Score = 20.6 bits (41), Expect = 4.3
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = +2

Query: 11  TSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 124
           T T NTP     +PT+   +    +T   S  R    P
Sbjct: 3   TGTNNTPVQPNAIPTTNNQIEMAAATKRVSDNRRSNKP 40


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +1

Query: 82  IDLAYVADENGYQPQGSHLPTPHPIPEAIARALPYIDAHPPSPSVVERK 228
           I+ A  +DE   +P    +PTP P P     + P   +  P+ S   +K
Sbjct: 382 INAALKSDEIPPEP----VPTPEPQPTQTTESEPTQASEQPTESSTTQK 426


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +2

Query: 8   RTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRT 112
           R    NTPP K ++ T+      N S    +L ++
Sbjct: 2   RVQPSNTPPEKSQLSTADTANLINKSLGKHNLQKS 36


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +2

Query: 8   RTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRT 112
           R    NTPP K ++ T+      N S    +L ++
Sbjct: 2   RVQPSNTPPEKSQLSTADTANLINKSLGKHNLQKS 36


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +2

Query: 8   RTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRT 112
           R    NTPP K ++ T+      N S    +L ++
Sbjct: 2   RVQPSNTPPEKSQLSTADTANLINKSLGKHNLQKS 36


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 73  GQPIDLAYVADENGYQPQGS 132
           G P+   Y+ D  G Q +GS
Sbjct: 587 GAPVMTRYLGDFEGNQVEGS 606


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,529
Number of Sequences: 336
Number of extensions: 1512
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6261139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)